Biocview "LinkageDisequilibrium"

BiostatQian/ASAFE

Ancestry Specific Allele Frequency Estimation

ASAFE

Ancestry Specific Allele Frequency Estimation

hierGWAS

Asessing statistical significance in predictive GWA studies

Simon-Coetzee/funcivar

Calculate overlaps and enrichment between genomic variants and genomic features or segmentations

CNVrd2

CNVrd2: a read depth-based method to detect and genotype complex common copy number variants from next generation sequencing data.

matmu/qtlizer

Comprehensive QTL annotation of GWAS results

Qtlizer

Comprehensive QTL annotation of GWAS results

matmu/Qtlizer

Comprehensive QTL annotation of GWAS results

ldblock

data structures for linkage disequilibrium measures in populations

vjcitn/ldblock

data structures for linkage disequilibrium measures in populations

crbasel/hierinf

Hierarchical Inference

hierinf

Hierarchical Inference

Pi

Leveraging Genetic Evidence to Prioritise Drug Targets at the Gene and Pathway Level

Pi

Leveraging Genetic Evidence to Prioritise Drug Targets at the Gene and Pathway Level

mklarqvist/rtomahawk

Tools for computing, querying and storing linkage-disequilibrium data