Simon-Coetzee/funcivar: Calculate overlaps and enrichment between genomic variants and genomic features or segmentations
Version 0.1.3

Calculate overlaps and enrichment between genomic variants and genomic features or segmentations. This is done with both a beta binomial test for enrichment and fisher's exact test to generate odds ratios.

Getting started

Package details

AuthorSimon Coetzee
Bioconductor views LinkageDisequilibrium VariantAnnotation Visualization
MaintainerSimon Coetzee <[email protected]>
LicenseGPL-3 + file LICENSE
Version0.1.3
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("devtools")
library(devtools)
install_github("Simon-Coetzee/funcivar")
Simon-Coetzee/funcivar documentation built on Nov. 7, 2017, 11:05 p.m.