Description Usage Format Details References
data frame of the non specific probes that need to be filtered out from 450k array datasets
1 | data("nonspecific_probes")
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A data frame
These non specific probes interrogates SNPs with mean allelic frequency (MAF) > 0.1, and also those that don't align uniquely on the genome. The list of nonspecific probes was obtained from Chen et al (2013) supplementary files
Chen YA, Lemire M, Choufani S, et al. Discovery of cross-reactive probes and polymorphic CpGs in the Illumina Infinium HumanMethylation450 microarray. Epigenetics 2013;8;203-9
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