Files in AFM
Atomic Force Microscope Image Analysis

CHANGES
MD5
NEWS
NAMESPACE
DESCRIPTION
data/AFMImageOfRegularPeaks.rda
data/AFMImageOfAluminiumInterface.rda
data/datalist
data/AFMImageOfOnePeak.rda
data/AFMImageOfNormallyDistributedHeights.rda
data/AFMImageCollagenNetwork.rda
R/runAFMApp.R R/AFMNetworksAnalyser.R R/AFMGaussianMixAnalyser.R R/AFM3DPrinter.R R/AFMFractalDimensionAnalyser.R R/AFMImageAnalyser.R R/AFMPSDAnalyser.R R/AFMImage.R R/AFMReportMaker.R R/AFMVariogramAnalyser.R R/pkgname.R man/calculateGaussianMixture.Rd man/existsSegment.Rd man/AFMImageVariogramAnalyser-getAutomaticWidthForVariogramCalculation.Rd man/shiftedPSDuv.Rd man/AFMImageVariogramAnalysis-getDTModelEvaluation-method.Rd man/generateCheckReport.Rd man/AFMImage-extractAFMImage.Rd man/displayIn3D.Rd man/isAngleBetweenEdgesAlwaysSuperiorToMinAngle.Rd man/AFMImageGaussianMixAnalysis-class.Rd man/AFMImageVariogramAnalysis-getDTModelSillRange-method.Rd man/getCoordinatesFromVertexId.Rd man/generateReport.Rd man/displaygridIgraphPlotFromEdges.Rd man/checkIsotropy.Rd man/calculateShortestPaths.Rd man/getBresenham2DSegment.Rd man/getVertexId.Rd man/AFMImageVariogramAnalysis-class.Rd man/performGaussianMixCalculation.Rd man/removeNode.Rd man/performAllPSDCalculation.Rd man/AFMImageVariogramAnalysis-updateProgress-method.Rd man/get3DImageFullfilename.Rd man/AFMImage-multiplyHeightsAFMImage.Rd man/getCircleSpatialPoints.Rd man/AFMImagePSDSlopesAnalysis-class.Rd man/displayColoredNetworkWithVerticesSize.Rd man/AFMImage-invertBinaryAFMImage.Rd man/calculateNetworkSkeleton.Rd man/identifyEdgesFromCircles.Rd man/getTopologyAFMImage.Rd man/getListOfDiameters.Rd man/thinImage.Rd man/getAllPointsToRemove.Rd man/AFMImage-sampleAFMImage.Rd man/AFMImageCollagenNetwork.Rd man/saveOnDiskIntersectionForRoughnessAgainstLengthscale.Rd man/AFMImageOfAluminiumInterface.Rd man/gridIgraphPlot.Rd man/AFMImageVariogramAnalyser-calculateOmnidirectionalVariogram.Rd man/identifyNodesAndEdges.Rd man/calculate3DModel-methods.Rd man/AreNodesConnected.Rd man/AFMImageNetworksAnalysis-class.Rd man/calculateIgraph.Rd man/RoughnessByLengthScale-methods.Rd man/analyse.Rd man/getIntersectionForRoughnessAgainstLengthscale.Rd man/getTriangle.Rd man/calculateNetworkParameters.Rd man/AFMImagePSDAnalysis-class.Rd man/calculateNetworks-methods.Rd man/AFMVariogramAnalyser-saveSpplotFromAFMImage.Rd man/getSurroundingVertexesList.Rd man/AFMFractalDimensionAnalyser-getFractalDimensions.Rd man/AFMImageAnalyser-class.Rd man/putImagesFromAnalysisOnDisk.Rd man/AFMImageOfNormallyDistributedHeights.Rd man/getNetworkGridLayout.Rd man/displayHolesIn3D.Rd man/canBeRemoved.Rd man/calculatePhysicalDistanceFromPath.Rd man/AFMImage-simplifyAFMImage.Rd man/getPaddedAFMImage.Rd man/checkNormality.Rd man/AFMImage3DModelAnalysis-class.Rd man/getAutoIntersectionForRoughnessAgainstLengthscale.Rd man/AFMImageFractalDimensionsAnalysis-class.Rd man/transformAFMImageForNetworkAnalysis-methods.Rd man/fusionCloseNodes.Rd man/generatePolygonEnvelope.Rd man/getAutoIntersectionForOmnidirectionalVariogram.Rd man/existsEdge.Rd man/pnormmix.Rd man/generateReportFromNanoscopeImageDirectory.Rd man/AFMImageVariogramAnalyser-calculateDirectionalVariograms.Rd man/dnormalmix.Rd man/AFMImage-makeBinaryAFMImage.Rd man/shiftFFT2D.Rd man/getMaxCircleMatrix.Rd man/AFMImageOfRegularPeaks.Rd man/AFMVariogramAnalyser-getSpplotFromAFMImage.Rd man/addNode.Rd man/omniVariogramSlopeAnalysis-class.Rd man/AFMImage-saveOnDisk.Rd man/getNyquistSpatialFrequency-methods.Rd man/AFMImage-importFromNanoscope.Rd man/loglike.normalmix.Rd man/exportToSTL.Rd man/AFMImageOfOnePeak.Rd man/AFMImage-isBinary.Rd man/simplifyNetwork.Rd man/isAdjacentToBetterVertex.Rd man/AFMImage-getHolesStatistics.Rd man/PSD1DAgainstFrequency-methods.Rd man/getAngle.Rd man/displaygridIgraphPlot.Rd man/identifyNodesWithCircles.Rd man/printVariogramModelEvaluations.Rd man/AFMImage-class.Rd man/createGraph.Rd man/getIntersectionPointWithBorder.Rd man/AFM.Rd man/putAnalysisOnDisk-methods.Rd man/AFMImageVariogramModel-class.Rd man/getLogLogOmnidirectionalSlopeGraph.Rd man/identifyIsolatedNodes.Rd man/AFMImageVariogramAnalysis-evaluateVariogramModels-method.Rd man/totalRMSRoughness.Rd man/identifyMaxCircleRadius.Rd man/removeLonguestEdge.Rd man/runAFMApp.Rd man/PSD2DAgainstFrequency-methods.Rd man/getRoughnessParameters-methods.Rd man/AFMImageFractalDimensionMethod-class.Rd man/getNetworkParameters-methods.Rd man/calculateHolesCharacteristics.Rd man/AFMImageAnalyser-class-initialize.Rd man/generateAFMImageReport.Rd man/AFMImage-filterAFMImage.Rd tests/testthat/configuration.R tests/testthat/testAFMImageGaussianMixesExport.R tests/testthat/testAFMImageGaussianMix.R tests/testthat/testAFMImageNetworkAnalyser.R tests/testthat/testAFMReportMaker.R
inst/CITATION
inst/shiny/AFM-desktop/ui.R inst/shiny/AFM-desktop/server.R
inst/shiny/AFM-desktop/www/index.html
AFM documentation built on Oct. 23, 2020, 5:23 p.m.