Description Usage Arguments Author(s) Examples
View source: R/AFMReportMaker.R
A function to analyse an AFMImage
and save on disk the analysis. The analysis are saved in outputs directory located in the image directory.
All the rdata and image files in the reportDirectory directory are loaded to generate one report for one AFMImage
.
1 |
AFMImage |
an |
M.Beauvais
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 | ## Not run:
library(AFM)
# Analyse the AFMImageOfRegularPeaks AFMImage sample from this package
data("AFMImageOfRegularPeaks")
AFMImage<-AFMImageOfRegularPeaks
# exportDirectory="C:/Users/my_windows_login" or exportDirectory="/home/ubuntu"
exportDirectory=tempdir()
AFMImage@fullfilename<-paste(exportDirectory,"AFMImageOfRegularPeaks.txt",sep="/")
# Start to check if your sample is normaly distributed and isotropic.
generateCheckReport(AFMImage)
# If the sample is normaly distributed and isotropic, generate a full report
generateReport(AFMImage)
# Analyse your own AFM image from nanoscope analysis (TM) software tool
anotherAFMImage<-importFromNanoscope("c:/users/my_windows_login/myimage.txt")
# Start to check if your sample is normaly distributed and isotropic.
generateCheckReport(anotherAFMImage)
# If your sample is normaly distributed and isotropic, generate a full report
generateReport(anotherAFMImage)
## End(Not run)
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