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For language-dependent output of AMR
functions, such as mo_name()
, mo_gramstain()
, mo_type()
and ab_name()
.
get_AMR_locale()
set_AMR_locale(language)
reset_AMR_locale()
translate_AMR(x, language = get_AMR_locale())
language |
language to choose. Use one of these supported language names or ISO-639-1 codes: English (en), Chinese (zh), Czech (cs), Danish (da), Dutch (nl), Finnish (fi), French (fr), German (de), Greek (el), Italian (it), Japanese (ja), Norwegian (no), Polish (pl), Portuguese (pt), Romanian (ro), Russian (ru), Spanish (es), Swedish (sv), Turkish (tr), or Ukrainian (uk). |
x |
text to translate |
The currently 20 supported languages are English (en), Chinese (zh), Czech (cs), Danish (da), Dutch (nl), Finnish (fi), French (fr), German (de), Greek (el), Italian (it), Japanese (ja), Norwegian (no), Polish (pl), Portuguese (pt), Romanian (ro), Russian (ru), Spanish (es), Swedish (sv), Turkish (tr), and Ukrainian (uk). All these languages have translations available for all antimicrobial drugs and colloquial microorganism names.
To permanently silence the once-per-session language note on a non-English operating system, you can set the package option AMR_locale
in your .Rprofile
file like this:
# Open .Rprofile file utils::file.edit("~/.Rprofile") # Then add e.g. Italian support to that file using: options(AMR_locale = "Italian")
And then save the file.
Please read about adding or updating a language in our Wiki.
The system language will be used at default (as returned by Sys.getenv("LANG")
or, if LANG
is not set, Sys.getlocale("LC_COLLATE")
), if that language is supported. But the language to be used can be overwritten in two ways and will be checked in this order:
Setting the package option AMR_locale
, either by using e.g. set_AMR_locale("German")
or by running e.g. options(AMR_locale = "German")
.
Note that setting an R option only works in the same session. Save the command options(AMR_locale = "(your language)")
to your .Rprofile
file to apply it for every session. Run utils::file.edit("~/.Rprofile")
to edit your .Rprofile
file.
Setting the system variable LANGUAGE
or LANG
, e.g. by adding LANGUAGE="de_DE.utf8"
to your .Renviron
file in your home directory.
Thus, if the package option AMR_locale
is set, the system variables LANGUAGE
and LANG
will be ignored.
# Current settings (based on system language)
ab_name("Ciprofloxacin")
mo_name("Coagulase-negative Staphylococcus (CoNS)")
# setting another language
set_AMR_locale("Dutch")
ab_name("Ciprofloxacin")
mo_name("Coagulase-negative Staphylococcus (CoNS)")
# setting yet another language
set_AMR_locale("German")
ab_name("Ciprofloxacin")
mo_name("Coagulase-negative Staphylococcus (CoNS)")
# set_AMR_locale() understands endonyms, English exonyms, and ISO-639-1:
set_AMR_locale("Deutsch")
set_AMR_locale("German")
set_AMR_locale("de")
ab_name("amox/clav")
# reset to system default
reset_AMR_locale()
ab_name("amox/clav")
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