Description Usage Arguments Value Examples
This function generates an MCMC parameters list to be used as mcmc_parameters
argument within AM_mcmc_fit
.
1 2 3 4 5 6 7 8 9 | AM_mcmc_parameters(
niter = 5000,
burnin = 2500,
thin = 1,
verbose = 1,
output = c("CI", "K"),
parallel = TRUE,
output_dir = NULL
)
|
niter |
Total number of MCMC iterations to be carried out. |
burnin |
Number of iterations to be considered as burn-in. Samples from this burn-in period are discarded. |
thin |
Thinning rate. This argument specifies how often a draw from the posterior distribution is stored after
burnin, i.e. one every -th samples is saved. Therefore, the toral number of MCMC samples saved is
( |
verbose |
A value from 0 to 4, that specifies the desired level of verbosity (0:None, 1:Warnings, 2:Debug, 3:Extras). |
output |
A list of parameters output to return. |
parallel |
Some of the algorithms can be run in parallel using OpenMP. When set to True, this parameter triggers the parallelism. |
output_dir |
Path to an output dir, where to store all the outputs. |
An AM_mcmc_configuration
Object. This is a list to be used as mcmc_parameters
argument with AM_mcmc_fit
.
1 2 | AM_mcmc_parameters (niter=1000, burnin=10000, thin=50)
AM_mcmc_parameters (niter=1000, burnin=10000, thin=50, output=c("CI","W","TAU"))
|
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