class.label: Gene class labels dataset

Description Usage Format Details

Description

The simulated class labels for each gene node, by merged community detection algorithm.

Usage

1

Format

A vector of length=#genes, the value is 1, 2, 3 as down-regulated/ null/ up-regulated class.

Details

Based on the simulated network structure. We firstly apply the fast community detection algorithm and then gradually merge the communities based on their pair-wised between edge counts, untill finally get three classes. The largest is assigned null, and then the upper/ down regulated are randomly chosen.


BANFF documentation built on May 29, 2017, 11:59 a.m.

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