EM.HODC: Hierachical ordered density clustering (HODC) Algorithm with...

Description Usage Arguments Details Value Examples

View source: R/EM.HODC.R

Description

Hierachical ordered density clustering (HODC) Algorithm with input generated by Mclust

Usage

1
EM.HODC(pvalue)

Arguments

pvalue

a vector of p-values obtained from large scale statistical hypothesis testing

Details

Without the information of networking, we can have an approximation to the marginal density by DPM model fitting on r. Suppose the number of finite mixture normals is equal to L_0+L_1, which means the number of classes we have, we apply HODC algorithm in partitioning the $L_0$ and $L_1$ components into two classes, For this function, the input is generated by Mclust

Value

a list of HODC algorithm returned parameters.

mean

the mean of each of two clusters

variance

the variance of each of two clusters

pro

the probability of each of two clusters

classificaiton

The classification corresponding to each cluster

Examples

1
2
3
4
5
6
## Not run: 
rstat=c(rnorm(50,mean=1),rnorm(50,mean=2),rnorm(100,mean=4),rnorm(100,mean=8))
pvalue=pnorm(-rstat)
mclustHODC=EM.HODC(pvalue)

## End(Not run)

BANFF documentation built on May 29, 2017, 11:59 a.m.

Related to EM.HODC in BANFF...