data.create: Create Synthetic Data

In BHTSpack: Bayesian Multi-Plate High-Throughput Screening of Compounds

Description

This function generates synthetic compound data.

Usage

data.create(N, nr, nc, M, p, s=NULL, covrow=NULL, covcol=NULL, c=0.0001, mat=FALSE)

Arguments

N	Number of compounds per plate.
nr	Number of plate rows.
nc	Number of plate columns.
M	Number of plates.
p	Probability of a compound being a hit.
s	Random seed (for reproducibility perposes). Default is NULL.
covrow	Noise plate row-covariance matrix. Default is NULL.
covcol	Noise plate column-covariance matrix. Default is NULL.
c	Constant for scaling plate noise. Default is 0.0001.
mat	Specifies a matrix (TRUE) or a vector (FALSE) plate format. Default is FALSE.

Value

This function returns a list consisting of the following elements:

Z	A list of matrices (mat=TRUE) or vectors (mat=FALSE) of compounds.
B	A list of compound indicators specifying a hit (1) or a non-hit (0).
I	A list of compound indicators specifying the muxture component (from 1 to K).

Examples

 #See package vignette

BHTSpack documentation built on Feb. 8, 2021, 5:07 p.m.