BoolModel-class: An S4 class to represent a Boolean Model

In BTR: Training and Analysing Asynchronous Boolean Models

Description

This class represents Boolean Model in a S4 BoolModel object.

Fields

target

character vector. It should contain gene symbols.

targer_var

character vector. It should contain the internal representation of gene variables, in the form of "v[0-9]+s"

rule_act

list of character vectors. Each element in the list should contain the activating gene variables for a particular target gene.

rule_inh

list of character vectors. Each element in the list should contain the inhibiting gene variables for a particular target gene.

BTR documentation built on May 2, 2019, 12:21 p.m.