outgraph_model: Output a Boolean Model into Cytoscape & Gephi readable format

In BTR: Training and Analysing Asynchronous Boolean Models

Description

This function outputs a Boolean Model in a format that is readable by Cytoscape and Gephi. Return invisibly the edges (with edge attributes) and node attributes. (i.e. list of 2 dfs)

Usage

outgraph_model(bmodel, path = getwd(), file = NULL, and_node = T)

Arguments

bmodel	S4 BoolModel object.
path	character. Specify path (AND NOT file name). Default to current working directory, i.e. getwd(). Set to NULL to disable file output.
file	character. Specify file name. Default to NULL for default file names.
and_node	logical. Specify AND as an individual node. Default to T.

BTR documentation built on May 2, 2019, 12:21 p.m.