gen_two_rmodel: Generate two random Boolean models with a specified number of...

In BTR: Training and Analysing Asynchronous Boolean Models

Description

This function generates a random Boolean model, then get another random Boolean model that is a specified number of steps apart by adding and/or removing genes. Returns a list of two S4 BoolModel objects.

Usage

gen_two_rmodel(var, steps, mvar = length(var), and_bool, in_bmodel = NULL,
  self_loop = F)

Arguments

var	character vector. A vector of single genes/variables to be used in the model.
steps	integer. Number of steps apart between the two models. If steps=0, give completely random starting model.
mvar	integer. Maximum number of variables in act or inh rule. Default to length(var).
and_bool	logical. Indicates whether to include AND terms or not.
in_bmodel	BoolModel object. The starting model supplied.
self_loop	logical. Indicates whether to allow self_loop. Default to F.

Details

The number of terms in a function for a gene is modelled by power-law distribution.

BTR documentation built on May 2, 2019, 12:21 p.m.