calculate_rcf: Calculates the relative cumulative frequency for amino acid...
In BaMORC: Bayesian Model Optimized Reference Correction Method for Assigned and Unassigned Protein NMR Spectra
Description
Usage
Arguments
Value
Examples
Description
This function calculates the relative cumulative frequency of amino acid and secondary structure combination.
Usage
1
calculate_rcf(sequence, secondary_structure)
Arguments
sequence
String of protein sequence with one letter convention
secondary_structure
String of protein secondary structure with single letter convention
Value
Relative cumulative frequency.
Examples
1
2
3
sequence = paste(RefDB_data$carbonDat[[1]]$AA, collapse = "")
secondary_structure = paste(RefDB_data$carbonDat[[1]]$SS, collapse = "")
relativeCumulativeFrequency = calculate_rcf(sequence, secondary_structure)
BaMORC documentation built on May 1, 2019, 6:35 p.m.
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Description Usage Arguments Value Examples
Description
This function calculates the relative cumulative frequency of amino acid and secondary structure combination.
Usage
1 | calculate_rcf(sequence, secondary_structure)
|
Arguments
sequence |
String of protein sequence with one letter convention |
secondary_structure |
String of protein secondary structure with single letter convention |
Value
Relative cumulative frequency.
Examples
1 2 3 | sequence = paste(RefDB_data$carbonDat[[1]]$AA, collapse = "")
secondary_structure = paste(RefDB_data$carbonDat[[1]]$SS, collapse = "")
relativeCumulativeFrequency = calculate_rcf(sequence, secondary_structure)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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