BatchExperiments: Statistical Experiments on Batch Computing Clusters

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Extends the BatchJobs package to run statistical experiments on batch computing clusters. For further details see the project web page.

Author
Bernd Bischl <bernd_bischl@gmx.net>, Michel Lang <michellang@gmail.com>, Olaf Mersmann <olafm@p-value.net>
Date of publication
2015-03-18 20:58:33
Maintainer
Michel Lang <michellang@gmail.com>
License
BSD_3_clause + file LICENSE
Version
1.4.1
URLs

View on CRAN

Man pages

addAlgorithm
Add an algorithm to registry.
addExperiments
Add experiemts to the registry.
addProblem
Add a problem to registry.
BatchExperiments
The BatchExperiments package
ExperimentJob
ExperimentJob
findExperiments
Find ids of experiments that match a query.
generateProblemInstance
Generate dynamic part of problem.
getAlgorithm
Get algorithm from registry by id.
getAlgorithmIds
Get ids of algorithms in registry.
getExperimentParts
Get all parts required to run a single job.
getIndex
Group experiments.
getJobs.ExperimentRegistry
Get jobs (here: experiments) from registry by id.
getProblem
Get problem from registry by id.
getProblemIds
Get ids of problems in registry.
getResultVars
Get variable groups of reduced results.
makeDesign
Create parameter designs for problems and algorithms.
makeExperimentRegistry
Construct a registry object for experiments.
reduceResultsExperiments
Reduce results into a data.frame with all relevant...
reduceResultsExperimentsParallel
Reduce very many results in parallel.
removeAlgorithm
Remove algorithm from registry.
removeExperiments
Remove jobs from registry.
removeProblem
Remove problem from registry.
summarizeExperiments
Summarize selected experiments.

Files in this package

BatchExperiments
BatchExperiments/inst
BatchExperiments/inst/CITATION
BatchExperiments/tests
BatchExperiments/tests/run-all.R
BatchExperiments/tests/testthat
BatchExperiments/tests/testthat/test_findExperiments.R
BatchExperiments/tests/testthat/test_summarizeExperiments.R
BatchExperiments/tests/testthat/test_trafo_results.R
BatchExperiments/tests/testthat/helpers.R
BatchExperiments/tests/testthat/test_reduceResults.R
BatchExperiments/tests/testthat/test_getJobInfo.R
BatchExperiments/tests/testthat/test_testJob.R
BatchExperiments/tests/testthat/test_reduceResultsExperimentsParallel.R
BatchExperiments/tests/testthat/test_addExperiments.R
BatchExperiments/tests/testthat/test_remove.R
BatchExperiments/tests/testthat/test_getIndex.R
BatchExperiments/tests/testthat/test_ids.R
BatchExperiments/tests/testthat/test_designs.R
BatchExperiments/tests/testthat/test_zzz_cleanup.R
BatchExperiments/tests/testthat/test_getJob.R
BatchExperiments/NAMESPACE
BatchExperiments/NEWS
BatchExperiments/R
BatchExperiments/R/getJobInfo.R
BatchExperiments/R/generateProblemInstance.R
BatchExperiments/R/database.R
BatchExperiments/R/getExperimentParts.R
BatchExperiments/R/helpers.R
BatchExperiments/R/Algorithm.R
BatchExperiments/R/designs.R
BatchExperiments/R/reduceResultsExperiments.R
BatchExperiments/R/reduceResultsExperimentsParallel.R
BatchExperiments/R/filenames.R
BatchExperiments/R/Problem.R
BatchExperiments/R/Experiment.R
BatchExperiments/R/removeAlgorithm.R
BatchExperiments/R/updateExperimentRegistry.R
BatchExperiments/R/ExperimentRegistry.R
BatchExperiments/R/getJob.R
BatchExperiments/R/getIndex.R
BatchExperiments/R/testJob.R
BatchExperiments/R/setJobFunction.R
BatchExperiments/R/summarizeExperiments.R
BatchExperiments/R/removeProblem.R
BatchExperiments/R/addExperiments.R
BatchExperiments/R/removeExperiments.R
BatchExperiments/R/findExperiments.R
BatchExperiments/R/getProblemIds.R
BatchExperiments/R/getProblem.R
BatchExperiments/R/zzz.R
BatchExperiments/R/getAlgorithm.R
BatchExperiments/R/getAlgorithmIds.R
BatchExperiments/R/applyJobFunction.R
BatchExperiments/MD5
BatchExperiments/DESCRIPTION
BatchExperiments/man
BatchExperiments/man/reduceResultsExperimentsParallel.Rd
BatchExperiments/man/getAlgorithmIds.Rd
BatchExperiments/man/addAlgorithm.Rd
BatchExperiments/man/addExperiments.Rd
BatchExperiments/man/BatchExperiments.Rd
BatchExperiments/man/getResultVars.Rd
BatchExperiments/man/getProblemIds.Rd
BatchExperiments/man/summarizeExperiments.Rd
BatchExperiments/man/getIndex.Rd
BatchExperiments/man/makeDesign.Rd
BatchExperiments/man/addProblem.Rd
BatchExperiments/man/makeExperimentRegistry.Rd
BatchExperiments/man/findExperiments.Rd
BatchExperiments/man/ExperimentJob.Rd
BatchExperiments/man/removeExperiments.Rd
BatchExperiments/man/getExperimentParts.Rd
BatchExperiments/man/reduceResultsExperiments.Rd
BatchExperiments/man/getAlgorithm.Rd
BatchExperiments/man/removeProblem.Rd
BatchExperiments/man/removeAlgorithm.Rd
BatchExperiments/man/getJobs.ExperimentRegistry.Rd
BatchExperiments/man/getProblem.Rd
BatchExperiments/man/generateProblemInstance.Rd
BatchExperiments/LICENSE