ccds.18: CCDS Reference Data (Build hg18)
In BaySIC: Bayesian Analysis of Significantly Mutated Genes in Cancer
Description
Usage
Format
Details
Source
References
Description
A ref.dat object for the Consensus Coding Sequence (CCDS) data from UCSC human (Homo sapiens) build hg18
Usage
1
Format
A data frame ref.dat object with 16631 genes on 34 variables (1 Gene column, 1 chromosome column, and 32 sequence context motifs
Details
Each sequence context motif column corresponds to the enumeration of CCDS bases in a given gene that satifies that motif. The gene column corresponds to HUGO gene ids.
Source
References
http://www.ncbi.nlm.nih.gov/CCDS/CcdsBrowse.cgi
BaySIC documentation built on May 2, 2019, 10:29 a.m.
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Description Usage Format Details Source References
Description
A ref.dat object for the Consensus Coding Sequence (CCDS) data from UCSC human (Homo sapiens) build hg18
Usage
1 |
Format
A data frame ref.dat object with 16631 genes on 34 variables (1 Gene column, 1 chromosome column, and 32 sequence context motifs
Details
Each sequence context motif column corresponds to the enumeration of CCDS bases in a given gene that satifies that motif. The gene column corresponds to HUGO gene ids.
Source
References
http://www.ncbi.nlm.nih.gov/CCDS/CcdsBrowse.cgi
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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