CCDS Reference Data (Build hg18)

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Description

A ref.dat object for the Consensus Coding Sequence (CCDS) data from UCSC human (Homo sapiens) build hg18

Usage

1

Format

A data frame ref.dat object with 16631 genes on 34 variables (1 Gene column, 1 chromosome column, and 32 sequence context motifs

Details

Each sequence context motif column corresponds to the enumeration of CCDS bases in a given gene that satifies that motif. The gene column corresponds to HUGO gene ids.

Source

http://genome.ucsc.edu/

References

http://www.ncbi.nlm.nih.gov/CCDS/CcdsBrowse.cgi