An example simulated dataset in the input format used by BaySIC (MUT-style), consisting of observed somatic mutations for 200 subjects
A dataframe object with 9882 observations on 7 variables
BaySIC utilizes a MUT-style format for input into its functions, which is a M\times7 dataframe where M is the number of observed mutations, and has the following structure:
chrcharacter string; chromosome (e.g.,"chr#","chrX","chrY")
startinteger; start basepair position
endinteger; end basepair position
idcharacter string; subject identification
typecharacter string; type of somatic mutation (e.g., "SNV", "INDEL")
genecharacter string; corresponding gene of mutation
contextcharacter string; sequence context (trinucleotide motif) of point mutation (
NA for INDEL)
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