extract_prob_pathogenic: Extract variant marginal probabilities of pathogenicity

In BeviMed: Bayesian Evaluation of Variant Involvement in Mendelian Disease

Extract variant marginal probabilities of pathogenicity

Description

Extract the marginal probability of pathogenicity for individual variants from BeviMed object, optionally broken down by mode of inheritance/model.

Usage

extract_prob_pathogenic(x, by_model = TRUE)

Arguments

x	Object of class BeviMed.
by_model	Logical value determining whether to return probabilities broken down by mode of inheritance.

Value

A vector of probabilities of pathogenicity for individual variants, or if by_model is TRUE, then a matrix of probabilities, with rows corresponding to modes of inheritance and columns to variants.

See Also

prob_pathogenic, bevimed

BeviMed documentation built on June 8, 2025, 12:40 p.m.