orderMCMC class | R Documentation |
The structure of an object of S3 class orderMCMC
.
An object of class orderMCMC
is a list containing at least the following
components:
DAG: adjacency matrix of a maximum scoring DAG found/sampled in the MCMC scheme.
CPDAG: adjacency matrix representing equivalence class of a maximum scoring DAG found/sampled in MCMC.
score: score of a maximum scoring DAG found/sampled in MCMC.
maxorder: order of a maximum scoring DAG found/sampled in MCMC.
info: a list containing information about parameters and results of MCMC.
trace: a vector containing log-scores of sampled DAGs.
Optional components:
traceadd
: list which consists of three or four elements (depending on MCMC scheme used for sampling):
incidence: list containg adjacency matrices of sampled DAGs
order: list of orders from which the DAGs were sampled
orderscores: order log-scores
scoretable
: object of class scorespace class
Polina Suter
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