BP_AutoFit: Fit model automatically

In BoneProfileR: Tools to Study Bone Compactness

Fit model automatically

Description

Open an image, fit a model and generate a report.

Usage

BP_AutoFit(
  file = file.choose(),
  xlsx = TRUE,
  rotation.angle = 0,
  center = "ontogenetic"
)

Arguments

file	The file to be opened
xlsx	TRUE, FALSE or the name and path of the report
rotation.angle	The angle of rotation for analysis
center	Which center to be used.

Details

BP_AutoFit fits model automatically

Value

Characteristics of an image with all the fit information

Author(s)

Marc Girondot [e-mail]

See Also

Other BoneProfileR: BP_ChooseBackground(), BP_ChooseCenter(), BP_ChooseForeground(), BP_DetectBackground(), BP_DetectCenters(), BP_DetectForeground(), BP_DuplicateAnalysis(), BP_EstimateCompactness(), BP_FitBayesianCompactness(), BP_FitMLCompactness(), BP_FitMLRadialCompactness(), BP_GetFittedParameters(), BP_ListAnalyses(), BP_LnLCompactness(), BP_OpenImage(), BP_Report(), Erinaceus_europaeus, plot.BoneProfileR(), summary.BoneProfileR()

Examples

## Not run: 
# Not run:
library(BoneProfileR)
path_Hedgehog <- system.file("extdata", "Erinaceus_europaeus_fem_2-1_small.png", 
                             package = "BoneProfileR")
 bone <- BP_AutoFit(file=path_Hedgehog, xlsx=TRUE)
 # or to open a dialog box
 bone <- BP_AutoFit()

## End(Not run)

BoneProfileR documentation built on Sept. 11, 2024, 6:07 p.m.