API for CACIMAR
Cross-Species Analysis of Cell Identities, Markers and Regulations
| Global functions | |
|---|---|
| AUCMarkerTest | Source code |
| CACIMAR_cols | Man page Source code |
| Cal_JointPower | Source code |
| Cal_JointPower2 | Source code |
| Cal_MarkersRoc | Source code |
| Cal_RelativePower | Source code |
| Cal_SharedMarkers | Source code |
| Cal_SharedMarkers_Species | Source code |
| DifferentialAUC | Source code |
| Format_Markers_Frac | Man page Source code |
| Get_OrthG | Source code |
| Get_scRNA_AggExp | Source code |
| Heatmap_Cor | Man page Source code |
| Identify_CellType | Man page Source code |
| Identify_CellTypes1 | Source code |
| Identify_CellTypes2 | Source code |
| Identify_ConservedCellTypes | Man page Source code |
| Identify_ConservedMarkers | Man page Source code |
| Identify_ConservedNetworks | Man page Source code |
| Identify_Markers | Man page Source code |
| Identify_Markers1 | Source code |
| Identify_Markers2 | Source code |
| Identify_Markers3 | Source code |
| Markertest | Source code |
| OrthG_Hs_Ch | Man page |
| OrthG_Hs_Mm | Man page |
| OrthG_Hs_Zf | Man page |
| OrthG_Mm_Ch | Man page |
| OrthG_Mm_Zf | Man page |
| OrthG_Zf_Ch | Man page |
| Plot_MarkersHeatmap | Man page Source code |
| Refine_Markers | Source code |
| Refine_Markers_Species | Source code |
| Refine_Used_OrthG | Source code |
| Revise_MarkersPower | Source code |
| Select_MarkersPower | Source code |
| Select_MarkersPower2 | Source code |
| Seurat_SubsetData | Source code |
| Sort_MarkersPower | Source code Source code |
| Sort_MarkersPower2 | Source code |
| validInput | Source code |
