API for CNVScope
A Versatile Toolkit for Copy Number Variation Relationship Data Analysis and Visualization

Global functions
CNVScopeserver Man page Source code
GRanges_to_underscored_pos Man page Source code
Primes Source code
averageMatrixEdges Man page Source code
calcCNVKernelProbDist Man page Source code
calcVecLMs Man page Source code
createChromosomalMatrixSet Man page Source code
divisors Man page Source code
downsample_genomic_matrix Man page Source code
extractNegLogPval Man page Source code
formSampleMatrixFromRawGDCData Man page Source code
freadGDCfile Man page Source code
getAnnotationMatrix Man page Source code
getAsymmetricBlockIndices Man page Source code
getBlockAverageMatrixFromBreakpoints Man page Source code
getGlobalRescalingStats Man page Source code
getInterchromosomalInteractivePlot Man page Source code
importBreakpointBed Man page Source code
mathead Man page Source code
nbl_result_matrix_sign_small Man page
postProcessLinRegMatrix Man page Source code
primeFactors Source code
primeSieve Source code
rebinGenomicInteractions Man page Source code
runCNVScopeLocal Man page Source code
runCNVScopeShiny Man page Source code
signedRescale Man page Source code
underscored_pos_to_GRanges Man page Source code
writeAsymmetricMeltedChromosomalMatrixToDisk Man page Source code
writeMeltedChromosomalMatrixToDisk Man page Source code
CNVScope documentation built on March 31, 2022, 1:07 a.m.