GRanges_to_underscored_pos: Convert GRanges object to underscord positions.

In CNVScope: A Versatile Toolkit for Copy Number Variation Relationship Data Analysis and Visualization

Convert GRanges object to underscord positions.

Description

This function converts row or column names (or any character vector of the format) into a GenomicRanges object.

Usage

GRanges_to_underscored_pos(input_gr, minusOneToEnd = T)

Arguments

input_gr	A GenomicRanges object
minusOneToEnd	Minus one position to end of each Genomic Range?

Examples

load(system.file("extdata","nbl_result_matrix_sign_small.rda",package = "CNVScope")) 
col_gr<-underscored_pos_to_GRanges(colnames(nbl_result_matrix_sign_small))
GRanges_to_underscored_pos(col_gr)

CNVScope documentation built on March 31, 2022, 1:07 a.m.