Association between several CNVs and disease

Description

This function repeatedly calls CNVassoc function

Usage

1
multiCNVassoc(x, formula, num.copies = 0:2, cnv.tol = 0.01, ...)

Arguments

x

a list of calling probabilities matrix for each CNV

formula

see 'formula' argument of CNVassoc function.

num.copies

See argument of cnv function.

cnv.tol

See argument of cnv function.

...

other arguments passed through 'CNVassoc' function.

Details

See vignette for an example

Value

A list of p-values for each CNV

References

Gonzalez JR, Subirana I, Escaramis G, Peraza S, Caceres A, Estivill X and Armengol L. Accounting for uncertainty when assessing association between copy number and disease: a latent class model. BMC Bioinformatics, 2009;10:172.

See Also

CNVassoc