Description Usage Arguments Details Author(s) See Also Examples
R function for customized display of an object of class CureRate
.
It allows the user to display the full info for any pair set of pairs
(object@actime[]
,object@futime[]
). The default is the display
of the summary power table. For more info, see the section Arguments below.
1 |
cr |
object of class |
full.results |
logical, if TRUE, the full results are displayed, and the values of
|
indac |
vector of integers, subvector of indices of |
indfu |
vector of integers, subvector of indices of |
The object cr
of class CureRate
must be specified.
If full.results
, indac
, and indfu
are not specified,
they assume the default values TRUE
, 0
, and 0
,
respectively, then the summary power table for the specified
object cr
is displayed only. If full.results
is not specified,
but both indac
, and indfu
are specified, then full.results
assumes the default value TRUE
and all the info for each pair of
(cr@actime[indac[]]
,cr@futime[indfu[]]
) are displayed together
with the summary power table. If full.results
is specified as
TRUE
, then the values of indac
, and indfu
,
specified or not, all info for all pairs
(cr@actime[]
,cr@futime[]
) are displayed together
with the summary power table.
Emil A. Cornea, Bahjat F. Qaqish, and Joseph G. Ibrahim
Maintainer: Emil A. Cornea <ecornea@live.unc.edu>
CR-package
, curerate
,
CureRate-class
, and show-methods
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 | ##---- Should be DIRECTLY executable !! ----
## Input Data
###############
# rho - specifies the value of rho in the G-rho test (Harrington and Fleming, 1982).
# rho = 0 gives the logrank test, and rho = 1 the Peto-Peto Wilcoxon test
#(and rho = -1 the test discussed by Gray and Tsiatis, 1989).
rho = 0
numreps = 500
##cureobs - probability of cure on the observation arm of the study
cureobs = .359
##curerx - probability of cure on the treatment arm of the study
curerx = .459
##medobs - median survival among the non-cured on observation
medobs = .747
##medrx - median survival among the non-cured on treatment
medrx = .859
##acrate - rate at which patients accrue, combined over both
##observation and treatment arms of the study
acrate = 232
##probrx - probability of assignment to the treatment arm
probrx = .5
##actime - accrual duration
actime = c(3.3, 3.5, 3.8);
##futime - followup duration
futime = c(2.0, 2.5)
##info - vector of information times for the interim looks
##must be an increasing sequence in (0,1]
info = c( .35, .61, .86, 1.0)
##crits - vector of critical values corresponding to the
##interim analysis time points specified in info
crits = c(3.6128, 2.6506, 2.1894, 2.0536)
###############################################################
### Log-rank test: rho=0 (default)
mycr<-curerate(rho ,numreps,cureobs,curerx,medobs,medrx,acrate,
probrx,actime,futime,info,crits)
mycr ### (*)
show(mycr) ### same as above
showcr(mycr) ### same as above
unclass(mycr)
showcr(mycr,full.results=TRUE)
showcr(mycr,indac=3,indfu=1)
|
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