export_for_snakemake: Export Capsule Data for Snakemake

In Capsule: Comprehensive Reproducibility Framework for R and Bioinformatics Analysis

Export Capsule Data for Snakemake

Description

Export all Capsule tracking data in YAML format for Snakemake pipelines

Usage

export_for_snakemake(output_file, include_checksums = TRUE)

Arguments

output_file	Character. Path to save config (required).
include_checksums	Logical. Include file checksums. Default TRUE.

Value

List containing config data

Examples

## Not run: 
export_for_snakemake(tempfile(fileext = ".yaml"))

## End(Not run)

Capsule documentation built on Nov. 11, 2025, 5:14 p.m.