API for CimpleG
A Method to Identify Single CpG Sites for Classification and Deconvolution
| Global functions | |
|---|---|
| .f | Source code |
| .onAttach | Source code |
| CimpleG | Man page Source code |
| CimpleG-package | Man page |
| CimpleG.SummarizedExperiment | Source code |
| CimpleG.data.frame | Source code |
| CimpleG.matrix | Source code |
| CimpleG_main | Source code |
| FUN | Source code Source code Source code Source code Source code Source code Source code |
| about | Source code |
| cimpleg | Man page |
| compute_ax | Man page |
| compute_diffmeans_sumvar | Man page Source code |
| cpg | Man page |
| darken | Man page Source code |
| deconv_pred_obs_plot | Man page Source code |
| deconv_ranking_plot | Man page Source code |
| deconvolution_barplot | Man page |
| deconvolution_epidish | Man page Source code |
| deconvolution_nmf | Man page Source code |
| deconvolution_nmf_annls | Source code |
| deconvolution_nnls | Man page Source code |
| diffmeans_sumvariance_plot | Man page Source code |
| dmsv_plot | Man page Source code |
| dmsv_plot.data.frame | Source code |
| dmsv_plot.matrix | Source code |
| dmsv_plot_base | Source code |
| do_cv | Source code |
| download_geo_gsm_idat | Source code |
| eval_test_data | Man page |
| get_cpg_annotation | Man page Source code |
| input_data_check_prep | Source code |
| lighten | Man page Source code |
| load_object | Man page Source code |
| make_color_palette | Man page Source code |
| make_deconv_pred_obs_data | Man page Source code |
| make_deconv_ref_matrix | Man page Source code |
| mean_imput | Source code |
| method_param_checkup | Source code |
| param_checkup | Source code |
| predict.CimpleG | Man page |
| prep_summarizedexp_data | Source code |
| run_deconvolution | Man page Source code |
| run_deconvolution.CimpleG | Source code |
| run_deconvolution.matrix | Source code |
| save_different_plot_format | Source code |
| save_object | Man page Source code |
| select_features | Man page |
| signature_plot | Man page Source code |
| signature_plot.CimpleG | Source code |
| signature_plot.character | Source code |
| signature_plot.list | Source code |
| signature_plot_base | Source code |
| test_data | Man page |
| test_targets | Man page |
| train_data | Man page |
| train_targets | Man page |
