make_deconv_pred_obs_data: Make tidy data for use in deconvolution plots

In CimpleG: A Method to Identify Single CpG Sites for Classification and Deconvolution

Make tidy data for use in deconvolution plots

Description

Produces data with varied deconvolution performance metrics.

Usage

make_deconv_pred_obs_data(
  dat,
  true_values_col,
  predicted_cols,
  sample_id_col,
  group_col
)

Arguments

dat	data.frame with predictions as columns, each row should be a prediction for a given sample and given group/celltype
true_values_col	A string with the name of the column with the true values in 'dat'. true values should be between 0 and 1.
predicted_cols	A vector of strings with the name of the columns with the predictions for different methods in 'dat'. predictions should be between 0 and 1
sample_id_col	A string with the name of the column with the sample name or ID in 'dat'.
group_col	A string with the name of the column containing the cell types or groups in 'dat'. group col should be a factor, otherwise the function will make it a factor

Value

tibble with tidied up deconvolution performance data in nested fields

CimpleG documentation built on Dec. 7, 2025, 1:07 a.m.