OffsetDFMaker: Returns a dataframe with the multiple ways to analyze how...

In Covid19Wastewater: Prepare, Analyze, and Visualize Covid-19 Wastewater Data

Returns a dataframe with the multiple ways to analyze how offset the Wastewater is from cases data

Description

Returns a dataframe with the multiple ways to analyze how offset the Wastewater is from cases data

Usage

OffsetDFMaker(
  length,
  startdate,
  enddate,
  casesdf,
  wastedf,
  N1_column = N1,
  N2_column = N2,
  site_column = site,
  date_column = date,
  case_column = conf_case
)

Arguments

length	The length of the time window for the results / 2
startdate	First day for both data sets
enddate	Last day for both data sets
casesdf	DF with case data columns needed(data,conf_case)
wastedf	DF with Wastewater data columns needed(date,N1,N2)
N1_column	name of N1 column
N2_column	name of N2 column
site_column	name of site column
date_column	name of date column
case_column	name of case column

Value

DF with the columns: number of days wastewater is offset, geo mean of(n1,n2) / confirmed cases,previous with rolling case average, MSE rolling average,Pearson correlation, Kendall correlation, Spearman correlation, R squared.

Examples

data(WasteWater_data, package = "Covid19Wastewater")
data("Case_data", package = "Covid19Wastewater")
#Will output a df from -10 to +10 days using all of the data from 2020-08-01 to 2023-01-01
OffsetDFMaker(10,as.Date("2020-08-01"), as.Date("2023-01-01"), Case_data, WasteWater_data) 

Covid19Wastewater documentation built on Aug. 25, 2023, 1:07 a.m.