refseq: SARS-Cov-2 genomic reference sequence from NCBI
In CovidMutations: Mutation Analysis Toolkit for COVID-19 (Coronavirus Disease 2019)
Description
Usage
Format
Source
Examples
Description
This reference sequence is derived from "fasta" file, preprocessed by
"read.fasta" function(refseq<-read.fasta("NC_045512.2.fa",forceDNAtolower=FALSE)[[1]]). It is used for annotating mutations in virus samples.
Usage
1
Format
"SeqFastadna" characters.
Source
https://pubmed.ncbi.nlm.nih.gov/32015508/
Examples
1
CovidMutations documentation built on Sept. 18, 2020, 5:06 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Format Source Examples
Description
This reference sequence is derived from "fasta" file, preprocessed by "read.fasta" function(refseq<-read.fasta("NC_045512.2.fa",forceDNAtolower=FALSE)[[1]]). It is used for annotating mutations in virus samples.
Usage
1 |
Format
"SeqFastadna" characters.
Source
https://pubmed.ncbi.nlm.nih.gov/32015508/
Examples
1 |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.