print.dbOptim: Prints the results from optim.relatedness()

In DNAtools: Tools for Analysing Forensic Genetic DNA Data

Prints the results from optim.relatedness()

Description

Prints the evaluated functions for the object function, best estimate of alpha and possibly list of variances.

Usage

## S3 method for class 'dbOptim'
print(x, var.list = FALSE, ...)

Arguments

x	Object returned by optim.relatedness()
var.list	Logical. Whether the (long) list of variance components should be printed to the screen.
...	...

Details

Prints the summary details of the fit

Value

A dataframe with [theta,value] and a vector of fitted alpha parameters

Author(s)

James Curran and Torben Tvedebrink

See Also

optim.relatedness

Examples

  ## Not run: 
  ## Simulate some allele frequencies:
  freqs <-  replicate(10, { g = rgamma(n=10,scale=4,shape=3); g/sum(g)},
              simplify=FALSE)
  ## Load the sample database:
  data(dbExample)
  obs <- dbCompare(dbExample,trace=FALSE)$m
  C3 <- optim.relatedness(obs,theta0=0.0,theta1=0.03,probs=freqs,
          objFunction='C3',max.bisect=30,trace=TRUE)
  print(C3)
  
## End(Not run)

DNAtools documentation built on March 18, 2022, 7:01 p.m.