getAdj_manual: Calculate adjacency matrix by user-specified radius
In DR.SC: Joint Dimension Reduction and Spatial Clustering
getAdj_manual R Documentation
Calculate adjacency matrix by user-specified radius
Description
an efficient function to find the neighbors based on the matrix of position and a pre-defined radius.
Usage
getAdj_manual(pos, radius)
Arguments
pos
is a n-by-d matrix of position, where n is the number of spots, and d is the dimension of coordinates.
radius
is a threashold of Euclidean distance to decide whether a spot is an neighborhood of another spot. For example, if the Euclidean distance between spot A and B is less than radius, then A is taken as the neighbourhood of B.
Value
A sparse matrix containing the neighbourhood
See Also
getAdj_auto, getAdj.
DR.SC documentation built on May 29, 2024, 2:12 a.m.
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| getAdj_manual | R Documentation |
Calculate adjacency matrix by user-specified radius
Description
an efficient function to find the neighbors based on the matrix of position and a pre-defined radius.
Usage
getAdj_manual(pos, radius)
Arguments
pos |
is a n-by-d matrix of position, where n is the number of spots, and d is the dimension of coordinates. |
radius |
is a threashold of Euclidean distance to decide whether a spot is an neighborhood of another spot. For example, if the Euclidean distance between spot A and B is less than radius, then A is taken as the neighbourhood of B. |
Value
A sparse matrix containing the neighbourhood
See Also
getAdj_auto, getAdj.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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