Files in DSAIDE
Dynamical Systems Approach to Infectious Disease Epidemiology

MD5
NEWS.md
DESCRIPTION
NAMESPACE
inst/CITATION
inst/media/stochasticSIRmodel.png
inst/media/heterogeneitymodel.svg
inst/media/R0modelfigure.svg
inst/media/dsaide_before_body.txt
inst/media/footer.html
inst/media/vectorbornemodel.svg
inst/media/IDCharacteristicmodel.svg
inst/media/directtransmissionmodel.png
inst/media/environmentaltransmissionmodel.png
inst/media/directtransmissionmodel.svg
inst/media/multipathogenmodel.svg
inst/media/stochasticSEIRmodel.svg
inst/media/idcontrolmodel.png
inst/media/sochasticSIRmodel.svg
inst/media/dsaide_after_body.txt
inst/media/dsaide.css
inst/media/dsaide-old.css
inst/media/references.bib
inst/media/multipathogenmodel.png
inst/media/environmentaltransmissionmodel.svg
inst/media/idpatternsmodel.svg
inst/media/evolutionmodel.svg
inst/media/heterogeneitymodel.png
inst/media/R0modelfigure.png
inst/media/vectorbornemodel.png
inst/media/basicSIRmodelfigure.svg
inst/media/evolutionmodel.png
inst/media/header.html
inst/media/stochasticSEIRmodel.png
inst/media/idpatternsmodel.png
inst/media/idcontrolmodel.svg
inst/media/IDCharacteristicmodel.png
inst/media/basicSIRmodelfigure.png
inst/doc/DSAIDE.html
inst/doc/DSAIDE.R inst/doc/DSAIDE.Rmd inst/shinyapps/DirectTransmission/DirectTransmission_Documentation.Rmd
inst/shinyapps/DirectTransmission/DirectTransmission_Documentation.html
inst/shinyapps/DirectTransmission/app.R
inst/shinyapps/StochasticSEIR/StochasticSEIR_Documentation.html
inst/shinyapps/StochasticSEIR/StochasticSEIR_Documentation.Rmd inst/shinyapps/StochasticSEIR/app.R inst/shinyapps/ReproductiveNumber1/ReproductiveNumber1_Documentation.Rmd
inst/shinyapps/ReproductiveNumber1/ReproductiveNumber1_Documentation.html
inst/shinyapps/ReproductiveNumber1/app.R inst/shinyapps/IDControl2/IDControl2_Documentation.Rmd
inst/shinyapps/IDControl2/IDControl2_Documentation.html
inst/shinyapps/IDControl2/app.R inst/shinyapps/CharacteristicsofID/CharacteristicsofID_Documentation.Rmd
inst/shinyapps/CharacteristicsofID/CharacteristicsofID_Documentation.html
inst/shinyapps/CharacteristicsofID/app.R
inst/shinyapps/IDControl1/IDControl1_Documentation.html
inst/shinyapps/IDControl1/IDControl1_Documentation.Rmd inst/shinyapps/IDControl1/app.R inst/shinyapps/VectorTransmission/VectorTransmission_Documentation.Rmd
inst/shinyapps/VectorTransmission/VectorTransmission_Documentation.html
inst/shinyapps/VectorTransmission/app.R
inst/shinyapps/EnvironmentalTransmission/EnvironmentalTransmission_Documentation.html
inst/shinyapps/EnvironmentalTransmission/EnvironmentalTransmission_Documentation.Rmd inst/shinyapps/EnvironmentalTransmission/app.R
inst/shinyapps/EvolutionaryDynamics/EvolutionaryDynamics_Documentation.html
inst/shinyapps/EvolutionaryDynamics/app.R inst/shinyapps/EvolutionaryDynamics/EvolutionaryDynamics_Documentation.Rmd inst/shinyapps/MultiPathogen/MultiPathogen_Documentation.Rmd
inst/shinyapps/MultiPathogen/MultiPathogen_Documentation.html
inst/shinyapps/MultiPathogen/app.R inst/shinyapps/ReproductiveNumber2/ReproductiveNumber2_Documentation.Rmd
inst/shinyapps/ReproductiveNumber2/ReproductiveNumber2_Documentation.html
inst/shinyapps/ReproductiveNumber2/app.R inst/shinyapps/StochasticSIR/StochasticSIR_Documentation.Rmd
inst/shinyapps/StochasticSIR/StochasticSIR_Documentation.html
inst/shinyapps/StochasticSIR/app.R inst/shinyapps/MainMenu/app.R inst/shinyapps/IDDynamicsIntro/IDDynamicsIntro_Documentation.Rmd
inst/shinyapps/IDDynamicsIntro/IDDynamicsIntro_Documentation.html
inst/shinyapps/IDDynamicsIntro/app.R
inst/shinyapps/HostHeterogeneity/HostHeterogeneity_Documentation.html
inst/shinyapps/HostHeterogeneity/HostHeterogeneity_Documentation.Rmd inst/shinyapps/HostHeterogeneity/app.R
inst/shinyapps/IDPatterns/IDPatterns_Documentation.html
inst/shinyapps/IDPatterns/IDPatterns_Documentation.Rmd inst/shinyapps/IDPatterns/app.R inst/docsfordevelopers/documentation.md inst/docsfordevelopers/newappfiles/NewModel_Documentation.Rmd
inst/docsfordevelopers/newappfiles/dsaide.css
inst/docsfordevelopers/newappfiles/NewModel_Documentation.html
inst/docsfordevelopers/newappfiles/simulate_newmodel.R inst/docsfordevelopers/newappfiles/app.R inst/simulatorfunctions/simulate_directtransmission.R inst/simulatorfunctions/simulate_introduction.R inst/simulatorfunctions/simulate_idcharacteristics.R inst/simulatorfunctions/generate_documentation.R inst/simulatorfunctions/simulate_reproductivenumber.R inst/simulatorfunctions/simulate_multipathogen.R inst/simulatorfunctions/simulate_vectortransmission.R inst/simulatorfunctions/simulate_idpatterns.R inst/simulatorfunctions/simulate_idcontrol.R inst/simulatorfunctions/simulate_stochastic_SEIR.R inst/simulatorfunctions/simulate_heterogeneity.R inst/simulatorfunctions/simulate_environmentaltransmission.R inst/simulatorfunctions/simulate_evolution.R inst/simulatorfunctions/simulate_stochastic_SIR.R
vignettes/dsaidevignettestyle.css
vignettes/mysimulator.R
vignettes/vignetterefs.bib
vignettes/DSAIDE.Rmd R/simulate_directtransmission.R R/simulate_introduction.R R/simulate_idcharacteristics.R R/dsaidemenu.R R/generate_documentation.R R/simulate_reproductivenumber.R R/simulate_multipathogen.R R/simulate_vectortransmission.R R/simulate_idpatterns.R R/generate_text.R R/generate_plots.R R/simulate_idcontrol.R R/simulate_stochastic_SEIR.R R/dsaideapps.R R/DSAIDE.R R/simulate_heterogeneity.R R/simulate_environmentaltransmission.R R/simulate_evolution.R R/simulate_stochastic_SIR.R man/simulate_multipathogen.Rd man/simulate_heterogeneity.Rd man/DSAIDE.Rd man/generate_text.Rd man/dsaideapps.Rd man/simulate_idcontrol.Rd man/simulate_stochastic_SEIR.Rd man/simulate_evolution.Rd man/simulate_idcharacteristics.Rd man/dsaidemenu.Rd man/simulate_stochastic_SIR.Rd man/simulate_idpatterns.Rd man/simulate_introduction.Rd man/generate_plots.Rd man/simulate_directtransmission.Rd man/generate_documentation.Rd man/simulate_reproductivenumber.Rd man/simulate_environmentaltransmission.Rd man/simulate_vectortransmission.Rd
build/vignette.rds
tests/testthat.R tests/testthat/Rplots.pdf tests/testthat/test-dsaideapps.R tests/testthat/test-generate_plots.R tests/testthat/test-generate_text.R
DSAIDE documentation built on Aug. 7, 2018, 9:04 a.m.