elisa_plate-class: S4 class definition of an elisa_plate object

In ELISAtools: ELISA Data Analysis with Batch Correction

Description

elisa_plate define the S4 class of an elisa_plate object

Arguments

batchID	characters to specify the batch
expID	characters to specify experiment or plate ID
desc	characters for the data/experiment information
data.std	data.frame for standard curve data
data.unknown	data.frame containing data for samples with unknown concentration
normFactor	numeric the correction factor for batch effects ("S").
mdata.unknown	data.frame containing the mean ODs and concentration by sample IDs.
mdata.std	data.frame containing the mean ODs and concentrations for standard data

Details

defining the S4 class of the elisa_plate object. This is the data structure to hold the elisa_plate Data. It contains different slots for holding both standard and unknown data. It also defines the regression model and the correction parameter for the batch effects.
Note: we assume each plate has its own standard curve.

Slots

batchID

character

expID

character

data.std

data.frame

data.unknown

data.frame

normFactor

numeric

desc

character

range.ODs

numeric

mdata.unknown

data.frame

mdata.std

data.frame

See Also

nls.lm

Examples

elisa_plate();

ELISAtools documentation built on Jan. 21, 2021, 5:08 p.m.