API for Eagle
Multiple Locus Association Mapping on a Genome-Wide Scale

Global functions
.build_design_matrix Source code
.calcMMt Source code
.calcVC Source code
.calc_extBIC Source code
.calc_extBIC_MLE Source code
.find_qtl Source code
.form_results Source code
.onAttach Source code
.print_final Source code
.print_header Source code
.print_results Source code
.print_title Source code
AM Man page Source code
Eagle Man page
Eagle-package Man page
FPR4AM Man page Source code
GenomicRel Source code
OpenGUI Man page Source code
ReadBlock Source code
ReadBlockBin Source code
ReadMap Man page Source code
ReadMarker Man page Source code
ReadPheno Man page Source code
ReadZmat Man page Source code
ReshapeM Source code
ReshapeM_rcpp Source code
SummaryAM Man page Source code
calculateH Source code
calculateMMt Source code
calculateMMt_rcpp Source code
calculateMMt_sqrt_and_sqrtinv Source code
calculateP Source code
calculate_a_and_vara Source code
calculate_a_and_vara_batch Source code
calculate_a_and_vara_batch_rcpp Source code
calculate_a_and_vara_rcpp Source code
calculate_reduced_a Source code
calculate_reduced_a_batch Source code
calculate_reduced_a_rcpp Source code
calculate_reduced_vara Source code
check.for.NA.in.trait Source code
check.inputs Source code
constructX Source code
create.ascii Source code
create.bin Source code
createM_ASCII_rcpp Source code
createM_BIN_rcpp Source code
createMt_ASCII_rcpp Source code
createMt_BIN_rcpp Source code
doquiet Source code
extract_geno Source code
extract_geno_Mt Source code
extract_geno_Mt_rcpp Source code
extract_geno_rcpp Source code
fasttimer Source code
fullpath Source code
getRowColumn Source code
Eagle documentation built on Nov. 7, 2019, 10:29 a.m.