Files in Eagle
Multiple Locus Association Mapping on a Genome-Wide Scale

MD5
NEWS
DESCRIPTION
NAMESPACE
inst/shiny_app/help.html
inst/shiny_app/css.css
inst/shiny_app/faq.rmd inst/shiny_app/app.R
inst/shiny_app/www/loading.gif
inst/shiny_app/www/images/pheno_banner.jpg
inst/shiny_app/www/images/Zmat_banner.jpg
inst/shiny_app/www/images/analyse_banner.jpg
inst/shiny_app/www/images/findings_banner.jpg
inst/shiny_app/www/images/map_banner.jpg
inst/shiny_app/www/images/logo.jpg
inst/shiny_app/www/images/HomeScreen.jpg
inst/shiny_app/www/images/plot_banner.jpg
inst/shiny_app/www/images/marker_banner.jpg
inst/extdata/geno.ped
inst/extdata/pheno.txt
inst/extdata/geno.txt
inst/extdata/Z.txt
inst/extdata/map.txt
R/onAttach.R R/calculate_reduced_a_batch.R R/calc_extBIC.R R/calculate_a_and_vara_batch.R R/emma_delta_ML_LL_wo_Z.R R/emma_REMLE.R R/OpenGUI.R R/doquiet.R R/check_inputs_mlam.R R/AM.R R/extract_geno.R R/calculateMMt_sqrt_and_sqrtinv.R R/ReadPheno.R R/emma_eigen_L_w_Z.R R/print_results.R R/create_ascii.R R/summary_am.R R/emma_misc.R R/print_title.R R/GenomicRel.R R/RcppExports.R R/extract_geno_Mt.R R/emma_delta_REML_dLL_w_Z.R R/calculateH.R R/print_header.R R/calcMMt.R R/emma_delta_REML_LL_w_Z.R R/calculate_reduced_a.R R/emma_MLE.R R/constructX.R R/emma_eigen_L_wo_Z.R R/ReshapeM.R R/check_for_NA_in_trait.R R/FPR4AM.R R/calc_extBIC_MLE.R R/calcVC.R R/calculate_a_and_vara.R R/fullpath.R R/calculateMMt.R R/print_final.R R/check_inputs.R R/calculate_reduced_vara.R R/emma_eigen_R_w_Z.R R/create_bin.R R/emma_delta_ML_LL_w_Z.R R/emma_delta_ML_dLL_w_Z.R R/ReadMap.R R/emma_eigen_R_wo_Z.R R/form_results.R R/ReadZmat.R R/calculateP.R R/build_design_matrix.R R/find_qtl.R R/ReadMarkerBin.R
src/calculate_reduced_a_rcpp.cpp
src/getRowColumn.cpp
src/removeColumn.cpp
src/readblock.h
src/extract_geno_Mt_rcpp.cpp
src/createMt_ASCII_rcpp.cpp
src/calculateMMt_rcpp.cpp
src/Eagle.h
src/createMt_BIN_rcpp.cpp
src/Makevars.win
src/createM_ASCII_rcpp.h
src/createM_BIN_rcpp.h
src/removeRow.cpp
src/ReshapeM_rcpp.cpp
src/ReadBlockBin.cpp
src/CreateBIN_PLINK.cpp
src/RcppExports.cpp
src/calculate_a_and_vara_batch_rcpp.cpp
src/createM_ASCII_rcpp.cpp
src/getNumRows.cpp
src/fasttimer.cpp
src/CreateASCIInospace_PLINK.cpp
src/createM_BIN_rcpp.cpp
src/Makevars
src/calculate_a_and_vara_rcpp.cpp
src/CreateBIN.cpp
src/CreateASCIInospace.cpp
src/getNumColumns.cpp
src/extract_geno_rcpp.cpp
src/ReadBlock.cpp
man/ReadZmat.Rd man/ReadMap.Rd man/FPR4AM.Rd man/SummaryAM.Rd man/ReadMarker.Rd man/Eagle-package.Rd man/ReadPheno.Rd man/AM.Rd man/OpenGUI.Rd
Eagle documentation built on Nov. 7, 2019, 10:29 a.m.