eco.plotWeight: Plot for a connection network

In EcoGenetics: Management and Exploratory Analysis of Spatial Data in Landscape Genetics

Description

Plot method for an eco.weight object. For examples, see eco.weight This function can make a static plot with the original coordinates and an additional graph with the coordinates transformed as ranks. It can also construct dynamic plots (force networks and circle networks).

Usage

eco.plotWeight(
  x,
  type = c("simple", "igraph", "edgebundle", "network"),
  group = NULL,
  fontSize = 10,
  ebColor = NULL,
  vertex.size = 10,
  vertex.label = NA,
  bounded = FALSE,
  ...
)

Arguments

x	Connection network
type	Plot type: "edgebundle", for a circular network, "network" for a tension network
group	Vector with classes assigned to the individuals, in the same original order
fontSize	Argument passed to forceNetwork contained in the weight object (which is the order of the table used to construct the weights)
ebColor	Vector with edge colors for the groups of the edgebundler plot (Experimental feature)
vertex.size	Parameter to plot.igraph
vertex.label	Parameter passed to plot.igraph
bounded	Logical. Value to enable (TRUE) or disable (FALSE) the bounding box limiting the force network graph extent see forceNetwork.
...	Additional arguments passed to plot.igraph

Author(s)

Leandro Roser [e-mail]

Examples

# see the examples in the function eco.weight:
# ?eco.weight

EcoGenetics documentation built on July 8, 2020, 5:46 p.m.