aaf: Compute the Frequency of Each Amino Acid in Each Species
In EnvNJ: Whole Genome Phylogenies Using Sequence Environments
Description
Usage
Arguments
Details
Value
See Also
Examples
Description
Computes the frequency of each amino acid in each species.
Usage
1
Arguments
data
input data must be a dataframe (see details).
Details
Input data must be a dataframe where each row corresponds to an individual protein, and each column identifies a species. Therefore, the columns' names of this dataframe must be coherent with the names of the OTUs being analyzed.
Value
A dataframe providing amino acid frequencies en the set of species. Rows correspond amino acids and columns to species.
See Also
env.sp(), otu.vector(), otu.space()
Examples
1
EnvNJ documentation built on Sept. 27, 2021, 5:07 p.m.
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Description Usage Arguments Details Value See Also Examples
Description
Computes the frequency of each amino acid in each species.
Usage
1 |
Arguments
data |
input data must be a dataframe (see details). |
Details
Input data must be a dataframe where each row corresponds to an individual protein, and each column identifies a species. Therefore, the columns' names of this dataframe must be coherent with the names of the OTUs being analyzed.
Value
A dataframe providing amino acid frequencies en the set of species. Rows correspond amino acids and columns to species.
See Also
env.sp(), otu.vector(), otu.space()
Examples
1 |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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