| AaJ.Lexis | The Aalen-Johansen estimator of state probabilities from a... |
| addCov.Lexis | Add covariates (typically clinical measurements) taken at... |
| addDrug.Lexis | Expand a Lexis object with information of drug exposure based... |
| apc.fit | Fit an Age-Period-Cohort model to tabular data. |
| apc.frame | Produce an empty frame for display of parameter-estimates... |
| apc.LCa | Fit Age-Period-Cohort models and Lee-Carter models with... |
| bdendo | A case-control study of endometrial cancer |
| B.dk | Births in Denmark by year and month of birth and sex |
| births | Births in a London Hospital |
| blcaIT | Bladder cancer mortality in Italian males |
| bootLexis | Create a bootstrap sample of persons (as identified by... |
| boxes.MS | Draw boxes and arrows for illustration of multistate models. |
| BrCa | Clinical status, relapse, metastasis and death in 2982 women... |
| brv | Bereavement in an elderly cohort |
| cal.yr | Functions to convert character, factor and various date... |
| ccwc | Generate a nested case-control study |
| ci.Crisk | Compute cumulative risks and expected sojourn times from... |
| ci.cum | Compute cumulative sum of estimates. |
| ci.eta | Linear predictor ('eta') from a formula, coefficients, vcov... |
| ci.lin | Compute linear functions of parameters with standard errors... |
| ci.pd | Compute confidence limits for a difference of two independent... |
| clogistic | Conditional logistic regression |
| contr.cum | Contrast matrices |
| crr.Lexis | Fit a competing risks regression model (Fine-Gray model)... |
| cutLexis | Cut follow-up at a specified date for each person. |
| detrend | Projection of a model matrix on the orthogonal complement of... |
| diet | Diet and heart data |
| DMconv | Conversion to diabetes |
| DMepi | Epidemiological rates for diabetes in Denmark 1996-2015 |
| DMlate | The Danish National Diabetes Register. |
| effx | Function to calculate effects |
| effx.match | Function to calculate effects for individually matched... |
| Epi | Epi: Functions for manipulation and statistical analysis of... |
| erl | Compute survival functions from rates and expected residual... |
| ewrates | Rates of lung and nasal cancer mortality, and total... |
| expand.data | Function to expand data for regression analysis of interval... |
| fit.add | Fit an additive excess risk model to interval censored data. |
| fit.baseline | Fit a piecewise contsnt intesity model for interval censored... |
| fit.mult | Fits a multiplicative relative risk model to interval... |
| float | Calculate floated variances |
| foreign.Lexis | Create a data structures suitable for use with packages... |
| ftrend | Fit a floating trend to a factor in generalized linear model |
| gen.exp | Generate covariates for drug-exposure follow-up from drug... |
| gmortDK | Population mortality rates for Denmark in 5-years age groups. |
| harm | Create a basis of harmonic functions. |
| hivDK | hivDK: seroconversion in a cohort of Danish men |
| Icens | Fits a regression model to interval censored data. |
| in.span | Is 'x' in the column span of matrix 'A' and what columns are... |
| LCa.fit | Fit Lee-Carter-type models for rates to arbitrarily shaped... |
| legendbox | Draw a box with text explaining the numbers in and between... |
| lep | An unmatched case-control study of leprosy incidence |
| Lexis | Create a Lexis object of follow-up |
| Lexis2msm | Convert a Lexis obejct to a data set suitable for input to... |
| Lexis.diagram | Plot a Lexis diagram |
| Lexis.lines | Draw life lines in a Lexis diagram. |
| lgrep | Convenience versions of grep |
| Life.lines | Compute dates/ages for life lines in a Lexis diagram |
| lines.apc | Plot APC-estimates in an APC-frame. |
| lls | Functions to manage and explore the workspace |
| lungDK | Male lung cancer incidence in Denmark |
| mat2pol | Plot columns of a matrix as stacked areas. |
| matshade | Plot confidence intervals as shaded areas around lines. |
| mcutLexis | Cut follow-up at multiple event dates and keep track of order... |
| M.dk | Mortality in Denmark 1974 ff. |
| merge.Lexis | Merge a Lexis object with a data frame |
| mh | Mantel-Haenszel analyses of cohort and case-control studies |
| mod.Lexis | Fit intensity models to follow-up data in Lexis objects |
| mortDK | Population mortality rates for Denmark in 1-year age-classes. |
| N2Y | Create risk time ("Person-Years") in Lexis triangles from... |
| NArray | Set up an array of NAs, solely from the list of dimnames |
| ncut | Function to group a variable in intervals. |
| N.dk | Population size in Denmark |
| nice | Nice breakpoints for axes on plots |
| nickel | A Cohort of Nickel Smelters in South Wales |
| Ns | Natural splines - (cubic splines linear beyond outermost... |
| occup | A small occupational cohort |
| pc.lines | Plot period and cohort effects in an APC-frame. |
| pctab | Create percentages in a table |
| plot.apc | Plot the estimates from a fitted Age-Period-Cohort model |
| plotCIF | Plotting Aalen-Johansen curves for competing events |
| plotEst | Plot estimates with confidence limits (forest plot) |
| plotevent | Plot Equivalence Classes |
| plot.Lexis | Lexis diagrams |
| poisreg | Family Object for Poisson Regression |
| pr | Diabetes prevance as of 2010-01-01 in Denmark |
| projection.ip | Projection of columns of a matrix. |
| rateplot | Functions to plot rates from a table classified by age and... |
| rbind.Lexis | Combining a Lexis objects with data frames or other Lexis... |
| rcutLexis | A function to cut follow-up at intermediate event times. |
| Relevel | Reorder and combine levels of a factor |
| rm.tr | Remove transitions from a Lexis object. |
| ROC | Function to compute and draw ROC-curves. |
| simLexis | Simulate a Lexis object representing follow-up in a... |
| splitLexis | Split follow-up time in a Lexis object |
| stack.Lexis | Functions to facilitate analysis of multistate models. |
| start.Lexis | Time series and other methods for Lexis objects |
| stattable | Tables of summary statistics |
| stattable.funs | Special functions for use in stat.table |
| steno2 | Clinical trial: Steno2 baseline and follow-up. |
| S.typh | Salmonella Typhimurium outbreak 1996 in Denmark. |
| subset.Lexis | Subsetting Lexis (and stacked.Lexis) objects |
| summary.Lexis | Summarize transitions and risk time from a Lexis object |
| Termplot | A wrapper for 'termplot' that optionally (but by default)... |
| testisDK | Testis cancer incidence in Denmark, 1943-1996 |
| thoro | Thorotrast Study |
| time.band | Extract time band data from a split Lexis object |
| time.scales | The time scales of a Lexis object |
| transform.Lexis | Transform a Lexis (or stacked.Lexis) object |
| twoby2 | Analysis of a two by two table |
| unLexis | Remove Lexis attributes from a 'Lexis' object. |
| Y.dk | Population risk time in Denmark |
