R/data.R

In EpiNow2: Estimate Real-Time Case Counts and Time-Varying Epidemiological Parameters

#' Literature Estimates of Generation Times
#'
#' @description `r lifecycle::badge("stable")`
#' Generation time estimates. See here for details:
#' https://github.com/epiforecasts/EpiNow2/blob/main/data-raw/generation-time.R
#' @format A `data.table` of summarising the distribution
"generation_times"

#' Literature Estimates of Incubation Periods
#'
#' @description `r lifecycle::badge("stable")`
#' Incubation period estimates. See here for details:
#'  https://github.com/epiforecasts/EpiNow2/blob/main/data-raw/incubation-period.R # nolint
#' @format A `data.table` of summarising the distribution
"incubation_periods"


#' Example Confirmed Case Data Set
#'
#' @description `r lifecycle::badge("stable")`
#' An example data frame of observed cases
#' @format A data frame containing cases reported on each date.
"example_confirmed"