bcMCA: Between-class MCA

In GDAtools: Geometric Data Analysis

Between-class MCA

Description

Between-class MCA, also called Barycentric Discriminant Analysis

Usage

bcMCA(data, class, excl = NULL, row.w = NULL, ncp = 5)

Arguments

data	data frame with only categorical variables, i.e. factors
class	factor specifying the class
excl	numeric vector indicating the indexes of the "junk" categories (default is NULL). See getindexcat or use ijunk interactive function to identify these indexes. It may also be a character vector of junk categories, specified in the form "namevariable.namecategory" (for instance "gender.male").
row.w	numeric vector of row weights. If NULL (default), a vector of 1 for uniform row weights is used.
ncp	number of dimensions kept in the results (by default 5)

Details

Between-class MCA is sometimes also called Barycentric Discriminant Analysis or Discriminant Correspondence Analysis. It consists in three steps : 1. Transformation of data into an indicator matrix (i.e. disjunctive table) 2. Computation of the barycenter of the transformed data for each category of class 3. Correspondence Analysis of the set of barycenters Between-class MCA can also be viewed as a special case of MCA with instrumental variables, with only one categorical instrumental variable.

Value

An object of class CA from FactoMineR package, with the indicator matrix of data as supplementary rows, and an additional item :

ratio

the between-class inertia percentage

Author(s)

Nicolas Robette

References

Abdi H., 2007, "Discriminant Correspondence Analysis", In: Neil Salkind (Ed.), Encyclopedia of Measurement and Statistics, Thousand Oaks (CA): Sage.

Bry X., 1996, Analyses factorielles multiples, Economica.

Lebart L., Morineau A. et Warwick K., 1984, Multivariate Descriptive Statistical Analysis, John Wiley and sons, New-York.)

See Also

DAQ, MCAiv

Examples

library(FactoMineR)
data(tea)
res <- bcMCA(tea[,1:18], tea$SPC)
# categories of class
plot(res, invisible = c("col", "row.sup"))
# Variables in tea data
plot(res, invisible = c("row", "row.sup"))
# between-class inertia percentage
res$ratio

GDAtools documentation built on Oct. 6, 2023, 5:07 p.m.