gwaa.data-class: Class "gwaa.data"
In GenABEL: genome-wide SNP association analysis
Description
Slots
Methods
Author(s)
See Also
Examples
Description
This class contains objects holding all GWAA data –
phenotypes, genotypes and other relevant information
Slots
phdata:dataframe with phenotypic data used in GWAA
gtdata:object of class snp.data-class used to store genotypic data, map, etc.
Methods
- [
signature(x = "gwaa.data", i = "ANY", j = "ANY", drop = "ANY"): subset
operations. x[i,j] will select people listed in i and SNPs listed in j.
- show
signature(object = "gwaa.data"): shows both parts of the object.
Take care that the objects are usually very large!
- summary
signature(object = "gwaa.data"): Calls
standard summary to describe phenotypic part and calls
summary.snp.data to snp.data-class
- gtdata
signature(object = "gwaa.data"): returns genotypic data
(object of snp.data-class)
- phdata
signature(object = "gwaa.data"): returns phenotypic data
(a data.frame)
- phdata<-
signature(object = "gwaa.data"): method do modify phenotypic data
(a data.frame)
Author(s)
Yurii Aulchenko
See Also
snp.data-class,
load.gwaa.data,
snp.mx-class
Examples
1
2
3
4
5
6
7
8
Example output
Loading required package: MASS
Loading required package: GenABEL.data
id sex age qt1 qt2 qt3 bt
p1 p1 1 43.4 -0.58 4.46 1.43 0
p2 p2 1 48.2 0.80 6.32 3.90 1
p3 p3 0 37.9 -0.52 3.26 5.05 1
p4 p4 1 53.8 -1.55 888.00 3.76 1
p5 p5 1 47.5 0.25 5.70 2.89 1
p6 p6 0 45.0 0.15 4.65 1.87 0
p7 p7 0 52.0 -0.56 4.64 2.49 0
p8 p8 1 42.5 NA 5.77 2.68 1
p9 p9 0 29.7 -2.26 0.71 1.45 0
p10 p10 0 45.8 -1.32 3.26 0.85 0
@nids = 10
@nsnps = 12
@nbytes = 3
@idnames = p1 p2 p3 p4 p5 p6 p7 p8 p9 p10
@snpnames = rs10 rs18 rs29 rs65 rs73 rs114 rs128 rs130 rs143 rs150 rs179 rs183
@chromosome = 1 1 1 1 1 1 1 1 1 1 1 1
@coding = 08 0b 0c 03 04 03 0c 04 08 0f 0c 03
@strand = 01 01 02 01 01 01 02 01 01 01 02 01
@map = 2500 3500 5750 13500 14250 24500 27000 27250 31000 33250 41500 42500
@male = 1 1 0 1 1 0 0 1 0 0
@gtps =
40 40 40 80 40 40 40 40 c0 c0 80 40
40 40 00 00 40 40 40 c0 40 40 c0 40
40 40 00 80 40 40 40 40 c0 c0 80 40
id sex age qt1 qt2 qt3 bt
p1 p1 1 43.4 -0.58 4.46 1.43 0
p2 p2 1 48.2 0.80 6.32 3.90 1
p3 p3 0 37.9 -0.52 3.26 5.05 1
p4 p4 1 53.8 -1.55 888.00 3.76 1
p5 p5 1 47.5 0.25 5.70 2.89 1
p6 p6 0 45.0 0.15 4.65 1.87 0
p7 p7 0 52.0 -0.56 4.64 2.49 0
p8 p8 1 42.5 NA 5.77 2.68 1
p9 p9 0 29.7 -2.26 0.71 1.45 0
p10 p10 0 45.8 -1.32 3.26 0.85 0
@nids = 10
@nsnps = 12
@nbytes = 3
@idnames = p1 p2 p3 p4 p5 p6 p7 p8 p9 p10
@snpnames = rs10 rs18 rs29 rs65 rs73 rs114 rs128 rs130 rs143 rs150 rs179 rs183
@chromosome = 1 1 1 1 1 1 1 1 1 1 1 1
@coding = 08 0b 0c 03 04 03 0c 04 08 0f 0c 03
@strand = 01 01 02 01 01 01 02 01 01 01 02 01
@map = 2500 3500 5750 13500 14250 24500 27000 27250 31000 33250 41500 42500
@male = 1 1 0 1 1 0 0 1 0 0
@gtps =
40 40 40 80 40 40 40 40 c0 c0 80 40
40 40 00 00 40 40 40 c0 40 40 c0 40
40 40 00 80 40 40 40 40 c0 c0 80 40
rs10 rs18 rs29 rs65 rs73 rs114 rs128 rs130 rs143 rs150
p1 0 0 0 1 0 0 0 0 2 2
p2 0 0 NA NA 0 0 0 2 0 0
p3 0 0 NA 1 0 0 0 0 2 2
p4 0 0 NA NA 0 0 0 2 NA 1
p5 0 1 0 2 0 0 0 2 2 2
p6 0 0 0 0 0 0 0 1 NA 2
p7 1 1 1 2 0 0 0 2 1 1
p8 0 0 0 2 NA 0 0 2 1 1
p9 0 1 0 2 0 0 0 0 2 2
p10 0 0 0 2 0 0 0 2 0 0
p11 0 0 NA 2 0 0 0 1 1 1
p12 0 0 0 1 0 NA 0 1 2 2
Chromosome Position Strand A1 A2 NoMeasured CallRate Q.2 P.11
rs10 1 2500 + T G 2384 0.9536 0.1325503356 1792
rs18 1 3500 + G A 2385 0.9540 0.2802935010 1232
rs29 1 5750 - G T 2374 0.9496 0.1377422072 1763
rs65 1 13500 + A T 2378 0.9512 0.7197224558 182
rs73 1 14250 + A G 2385 0.9540 0.0134171908 2331
rs114 1 24500 + A T 2393 0.9572 0.1167989971 1868
rs128 1 27000 - G T 2391 0.9564 0.0248849854 2281
rs130 1 27250 + A G 2379 0.9516 0.6937788987 222
rs143 1 31000 + T G 2377 0.9508 0.4772822886 655
rs150 1 33250 + C A 2369 0.9476 0.6599831152 267
rs179 1 41500 - G T 2365 0.9460 0.4405919662 732
rs183 1 42500 + A T 2363 0.9452 0.2096910707 1479
rs186 1 43000 + A G 2376 0.9504 0.0795454545 2011
rs200 1 47000 + A T 2384 0.9536 0.2548238255 1317
rs239 1 57750 - A G 2369 0.9476 0.2471506965 1344
rs245 1 60500 + A T 2380 0.9520 0.1502100840 1725
rs298 1 76250 + C A 2362 0.9448 0.0351397121 2200
rs300 1 77000 + A C 2383 0.9532 0.1286193873 1807
rs312 1 78500 - G A 2370 0.9480 0.3329113924 1039
rs324 1 82500 + G C 2365 0.9460 0.5581395349 454
rs332 1 84500 - A G 2372 0.9488 0.0400505902 2184
rs335 1 85250 + A G 2383 0.9532 0.0602182123 2104
rs348 1 88000 + G C 2380 0.9520 0.5159663866 530
rs361 1 90000 + T G 2378 0.9512 0.5237594617 512
rs365 1 91250 - C G 2384 0.9536 0.3034815436 1156
rs372 1 92750 + C G 2370 0.9480 0.1603375527 1670
rs375 1 93250 - T A 2373 0.9492 0.4456384324 749
rs377 1 95000 - T A 2371 0.9484 0.0883593420 1973
rs383 1 96000 - G C 2358 0.9432 0.8871925360 31
rs386 1 96250 - T A 2375 0.9500 0.0875789474 1979
rs388 1 96500 - C A 2377 0.9508 0.8883045856 31
rs404 1 101500 + G C 2386 0.9544 0.0681056161 2071
rs422 1 105500 - C A 2381 0.9524 0.1711465771 1631
rs435 1 109250 - A C 2385 0.9540 0.6375262055 304
rs455 1 114250 - C T 2370 0.9480 0.6375527426 301
rs476 1 118250 - C T 2402 0.9608 0.7785179017 103
rs530 1 131750 + C T 2390 0.9560 0.4619246862 702
rs534 1 132750 - G T 2376 0.9504 0.1683501684 1647
rs555 1 138500 - C A 2370 0.9480 0.2421940928 1361
rs568 1 142500 - A G 2381 0.9524 0.6976060479 224
rs573 1 143250 + T G 2370 0.9480 0.6936708861 228
rs611 1 157500 - T A 2377 0.9508 0.1243163652 1820
rs614 1 157750 + A G 2371 0.9484 0.0103331927 2322
rs615 1 158000 + G T 2375 0.9500 0.1269473684 1808
rs616 1 158500 + G T 2383 0.9532 0.5461603021 507
rs620 1 159250 - A G 2379 0.9516 0.0886927280 1970
rs635 1 165250 - T C 2364 0.9456 0.9208967851 16
rs663 1 170750 - G T 2376 0.9504 0.6887626263 216
rs670 1 172250 + T C 2385 0.9540 0.3306079665 1055
rs675 1 172750 - T C 2380 0.9520 0.6684873950 248
rs683 1 175750 + T C 2379 0.9516 0.6296763346 308
rs691 1 178250 + A G 2376 0.9504 0.3684764310 932
rs721 1 184500 + G T 2382 0.9528 0.4330394626 764
rs724 1 184750 - T A 2392 0.9568 0.3687290970 941
rs726 1 185000 - T C 2377 0.9508 0.1230542701 1825
rs735 1 187750 - C G 2358 0.9432 0.3710771841 921
rs739 1 189000 - A T 2390 0.9560 0.6815899582 245
rs754 1 193250 + T A 2373 0.9492 0.6925832280 228
rs755 1 193500 - C G 2362 0.9448 0.2993226080 1157
rs758 1 194000 - C G 2370 0.9480 0.6976793249 217
rs762 1 195000 - A T 2378 0.9512 0.3074011775 1140
rs768 1 196000 + T C 2400 0.9600 0.1395833333 1778
rs781 1 201750 - T A 2363 0.9452 0.1330935252 1773
rs785 1 202250 + G T 2363 0.9452 0.1487515870 1708
rs786 1 203250 + A G 2387 0.9548 0.2063259321 1504
rs789 1 204750 + T A 2376 0.9504 0.0814393939 2006
rs804 1 209000 + G A 2377 0.9508 0.0790912915 2019
rs814 1 211250 - T A 2386 0.9544 0.5393964795 508
rs830 1 215750 + C T 2371 0.9484 0.4983129481 613
rs849 1 220500 + T A 2373 0.9492 0.3763168984 925
rs851 1 220750 + C A 2386 0.9544 0.3074182733 1148
rs888 1 226500 - T A 2375 0.9500 0.0374736842 2199
rs891 1 227500 - G T 2380 0.9520 0.0743697479 2036
rs903 1 228500 - G A 2385 0.9540 0.0784067086 2025
rs928 1 235500 - T C 2383 0.9532 0.4139739824 811
rs954 1 241000 + T C 2379 0.9516 0.3167297184 1096
rs956 1 241750 - T C 2371 0.9484 0.0881484606 1970
rs977 1 246500 - T C 2362 0.9448 0.0836155800 1975
rs978 1 247000 + A T 2373 0.9492 0.5054782975 577
rs981 1 247750 + T A 2384 0.9536 0.2065855705 1496
rs983 1 248000 - A C 2383 0.9532 0.5127989929 562
rs1017 1 256750 - T A 2386 0.9544 0.4006705784 861
rs1020 1 257750 + G C 2371 0.9484 0.1701813581 1627
rs1061 1 269000 - A C 2371 0.9484 0.0113876002 2318
rs1067 1 274750 + T C 2373 0.9492 0.1550779604 1686
rs1084 1 278500 + T G 2397 0.9588 0.0567375887 2130
rs1093 1 281750 - C A 2372 0.9488 0.4013490725 829
rs1097 1 283000 - C T 2386 0.9544 0.4725481978 658
rs1110 1 286250 - A T 2373 0.9492 0.6019806153 362
rs1129 1 291000 + G T 2383 0.9532 0.0109106169 2332
rs1130 1 291500 - C G 2376 0.9504 0.6113215488 365
rs1133 1 292000 - T C 2376 0.9504 0.5791245791 416
rs1176 1 304500 - A G 2381 0.9524 0.4880302394 630
rs1178 1 304750 + C T 2378 0.9512 0.4966358284 616
rs1180 1 305250 - T C 2395 0.9580 0.4870563674 635
rs1181 1 305500 - A G 2365 0.9460 0.2940803383 1194
rs1187 1 306750 + G C 2376 0.9504 0.2133838384 1481
rs1191 1 307750 - A G 2377 0.9508 0.4892721918 619
rs1199 1 309500 - A C 2359 0.9436 0.0118694362 2303
rs1200 1 309750 + A G 2374 0.9496 0.5025273799 593
rs1204 1 310250 - G C 2369 0.9476 0.1430983537 1739
rs1206 1 311000 + T A 2379 0.9516 0.1231609920 1829
rs1213 1 313000 - G A 2382 0.9528 0.4695633921 673
rs1228 1 319000 - A T 2375 0.9500 0.2143157895 1460
rs1234 1 320500 - C G 2372 0.9488 0.5459527825 492
rs1239 1 321000 + G T 2381 0.9524 0.4523309534 726
rs1260 1 325500 + T C 2380 0.9520 0.1964285714 1525
rs1271 1 328750 - A C 2356 0.9424 0.0250424448 2241
rs1275 1 329250 - T G 2369 0.9476 0.5443224989 488
rs1277 1 329750 + G T 2371 0.9484 0.4519190215 706
rs1281 1 331750 - G T 2396 0.9584 0.5411101836 506
rs1282 1 332000 - C G 2369 0.9476 0.0848459266 1982
rs1295 1 335000 + G A 2379 0.9516 0.2713324926 1242
rs1296 1 335875 - T G 2345 0.9380 0.0051172708 2321
rs1307 1 336750 - A G 2382 0.9528 0.7458018472 134
rs1318 1 339000 + A T 2382 0.9528 0.5776658270 402
rs1335 1 342250 - G C 2385 0.9540 0.5677148847 427
rs1341 1 343000 - C T 2378 0.9512 0.0986122792 1927
rs1344 1 343750 + G T 2389 0.9556 0.4644202595 670
rs1372 1 350750 + C A 2368 0.9472 0.1993243243 1505
rs1389 1 354250 - T C 2352 0.9408 0.0603741497 2078
rs1402 1 358000 + C T 2384 0.9536 0.6430369128 307
rs1403 1 358250 + A C 2369 0.9476 0.3573237653 977
rs1405 1 358750 + C G 2366 0.9464 0.0019019442 2357
rs1414 1 360500 + A C 2375 0.9500 0.0680000000 2066
rs1423 1 362500 - T A 2381 0.9524 0.4002519950 862
rs1430 1 364250 - C A 2362 0.9448 0.0112193057 2309
rs1437 1 365500 + G A 2369 0.9476 0.4195863233 798
rs1452 1 369500 - T C 2366 0.9464 0.1760355030 1605
rs1467 1 372250 + G A 2362 0.9448 0.1828958510 1574
rs1476 1 373750 - G C 2398 0.9592 0.1834862385 1596
rs1543 1 389500 - A C 2362 0.9448 0.4788314987 637
rs1548 1 390500 - A T 2380 0.9520 0.4825630252 631
rs1559 1 392750 - C A 2363 0.9452 0.5666525603 430
rs1577 1 395500 + C G 2376 0.9504 0.2866161616 1203
rs1583 1 397000 + A C 2370 0.9480 0.3784810127 920
rs1585 1 397750 - A C 2373 0.9492 0.3324905183 1056
rs1590 1 399250 + G T 2381 0.9524 0.5107097858 586
rs1594 1 400250 + G T 2369 0.9476 0.1853102575 1566
rs1609 1 404750 + A C 2386 0.9544 0.0810980721 2016
rs1610 1 405000 + C A 2385 0.9540 0.1960167715 1535
rs1621 1 407000 + G C 2370 0.9480 0.9179324895 17
rs1634 1 409500 + T C 2376 0.9504 0.3118686869 1118
rs1636 1 409750 - C G 2398 0.9592 0.6040450375 374
rs1651 1 412750 - T A 2372 0.9488 0.1998313659 1517
rs1659 1 416250 - G C 2368 0.9472 0.6583614865 267
rs1664 1 417000 + C A 2382 0.9528 0.3394206549 1027
rs1667 1 417250 - C G 2381 0.9524 0.6587568249 271
rs1674 1 420500 - A T 2380 0.9520 0.3237394958 1076
rs1682 1 422750 + C A 2369 0.9476 0.0177289996 2285
rs1705 1 427500 - G A 2362 0.9448 0.0347163421 2198
rs1706 1 428500 - C G 2398 0.9592 0.3035863219 1172
rs1711 1 429500 - G A 2386 0.9544 0.0450544845 2175
rs1713 1 430250 + T A 2363 0.9452 0.1749894202 1610
rs1720 1 432500 - G C 2374 0.9496 0.0897219882 1967
rs1724 1 433500 + C T 2395 0.9580 0.0897703549 1984
rs1726 1 433750 - G A 2385 0.9540 0.2995807128 1170
rs1727 1 434000 - G C 2402 0.9608 0.2562447960 1336
rs1735 1 437000 + C G 2381 0.9524 0.5417891642 498
rs1747 1 439500 - G T 2373 0.9492 0.6148335440 344
rs1751 1 440250 + G C 2373 0.9492 0.0516224189 2131
rs1775 1 446000 + G T 2385 0.9540 0.6306079665 323
rs1785 1 447500 - A G 2387 0.9548 0.7903225806 99
rs1789 1 448000 - A C 2383 0.9532 0.7920688208 97
rs1796 1 451500 + A G 2379 0.9516 0.2459016393 1353
rs1823 1 458250 - C A 2387 0.9548 0.1478843737 1721
rs1840 1 461500 - C T 2373 0.9492 0.8185840708 67
rs1841 1 461750 + A T 2367 0.9468 0.1787072243 1584
rs1843 1 462000 + T A 2364 0.9456 0.2303299492 1410
rs1847 1 469875 - T A 2381 0.9524 0.0468290634 2160
rs1895 1 477750 + T G 2372 0.9488 0.0594435076 2096
rs1904 1 479500 + C T 2376 0.9504 0.9425505051 6
rs1921 1 484000 + A T 2371 0.9484 0.0588359342 2098
rs1928 1 487000 - G A 2378 0.9512 0.6099663583 356
rs1932 1 487750 - G T 2392 0.9568 0.3187709030 1112
rs1946 1 492000 - A T 2383 0.9532 0.6208560638 338
rs1950 1 493750 + C A 2383 0.9532 0.0751154008 2039
rs1953 1 494000 - T G 2388 0.9552 0.5161222781 556
rs1959 1 496500 + T G 2372 0.9488 0.4224283305 795
rs1962 1 497500 + C T 2377 0.9508 0.2503155238 1326
rs1989 1 502250 - C A 2382 0.9528 0.0104953820 2332
rs1997 1 503750 + G T 2388 0.9552 0.0665829146 2078
rs2001 1 505250 - A G 2377 0.9508 0.1870004207 1568
rs2039 1 514500 - T C 2373 0.9492 0.1441213654 1738
rs2058 1 519250 - C G 2382 0.9528 0.1647774979 1670
rs2061 1 520000 + T G 2383 0.9532 0.0146873689 2313
rs2075 1 522750 + A T 2379 0.9516 0.1345102984 1783
rs2078 1 524250 - A C 2392 0.9568 0.7938963211 112
rs2082 1 525500 + G A 2366 0.9464 0.8290363483 65
rs2100 1 531000 + C T 2373 0.9492 0.2855035820 1202
rs2108 1 533250 - G C 2380 0.9520 0.4903361345 605
rs2109 1 534000 - T G 2383 0.9532 0.2629039026 1282
rs2110 1 534250 + G A 2358 0.9432 0.1181085666 1834
rs2112 1 534500 + A G 2366 0.9464 0.3159340659 1104
rs2117 1 535250 + C A 2370 0.9480 0.3149789030 1109
rs2130 1 540250 - C A 2364 0.9456 0.2899746193 1189
rs2144 1 542250 - G T 2379 0.9516 0.6143337537 352
rs2153 1 544500 + C G 2366 0.9464 0.5097210482 566
rs2164 1 547500 + T C 2379 0.9516 0.4394703657 750
rs2177 1 550000 + T C 2375 0.9500 0.4869473684 622
rs2180 1 550750 + G C 2380 0.9520 0.1735294118 1630
rs2181 1 552000 - C G 2371 0.9484 0.0122311261 2313
rs2193 1 553250 + C G 2374 0.9496 0.4113310868 829
rs2229 1 561750 - G A 2389 0.9556 0.0948095437 1960
rs2237 1 564500 - G C 2380 0.9520 0.3638655462 965
rs2247 1 568000 + G A 2379 0.9516 0.1897856242 1562
rs2263 1 572000 - A C 2379 0.9516 0.9188734763 10
rs2277 1 575250 + A G 2357 0.9428 0.2492575308 1347
rs2292 1 579500 - G C 2361 0.9444 0.2753070733 1251
rs2311 1 584250 - G C 2367 0.9468 0.0887198986 1969
rs2333 1 590250 - C G 2395 0.9580 0.3248434238 1096
rs2336 1 591250 + C A 2368 0.9472 0.3526182432 1010
rs2338 1 592000 - A C 2384 0.9536 0.6159815436 360
rs2348 1 593250 + A G 2389 0.9556 0.0615320218 2107
rs2349 1 593750 + A C 2382 0.9528 0.3312342569 1076
rs2354 1 594750 - G A 2375 0.9500 0.6625263158 275
rs2356 1 596250 - T A 2346 0.9384 0.6649616368 276
rs2374 1 602000 + C A 2389 0.9556 0.3499372122 1019
rs2384 1 604250 + G T 2389 0.9556 0.3195897865 1123
rs2404 1 612750 + A G 2368 0.9472 0.7179054054 195
rs2408 1 613500 - G T 2370 0.9480 0.0909282700 1958
rs2416 1 615500 + C T 2388 0.9552 0.1593383585 1696
rs2443 1 622250 - G A 2369 0.9476 0.1456310680 1725
rs2468 1 628000 + A G 2400 0.9600 0.3200000000 1104
rs2470 1 628750 + A G 2387 0.9548 0.6797235023 243
rs2474 1 629500 - T G 2372 0.9488 0.0862141653 1978
rs2494 1 635250 + T G 2375 0.9500 0.4355789474 758
rs2506 1 640750 - T C 2378 0.9512 0.1957527334 1550
rs2508 1 641250 - G T 2389 0.9556 0.0797404772 2030
rs2517 1 643250 - C G 2378 0.9512 0.5527754415 471
rs2532 1 646500 - C G 2372 0.9488 0.4021922428 860
rs2533 1 646625 + C T 2388 0.9552 0.9015912898 20
rs2534 1 646750 - C T 2370 0.9480 0.9006329114 21
rs2535 1 647000 + A G 2358 0.9432 0.0059372349 2330
rs2540 1 650750 + C G 2370 0.9480 0.0898734177 1958
rs2547 1 653500 + A G 2373 0.9492 0.1101980615 1873
rs2551 1 654250 + G A 2396 0.9584 0.0916110184 1972
rs2556 1 656750 - C G 2369 0.9476 0.4054453356 838
rs2563 1 658000 + T A 2383 0.9532 0.5335711288 513
rs2567 1 658500 - C G 2373 0.9492 0.4951538137 601
rs2568 1 658750 + T G 2360 0.9440 0.4966101695 592
rs2571 1 660000 - A T 2373 0.9492 0.1630847029 1663
rs2578 1 661750 + C G 2370 0.9480 0.7006329114 203
rs2597 1 666250 - T G 2374 0.9496 0.0526537489 2131
rs2598 1 666750 + A C 2391 0.9564 0.0424508574 2199
rs2607 1 670000 - A T 2380 0.9520 0.3537815126 996
rs2631 1 674250 + T C 2384 0.9536 0.4393875839 754
rs2653 1 681250 + A C 2359 0.9436 0.1983891479 1509
rs2659 1 682000 - G A 2371 0.9484 0.0097005483 2326
rs2664 1 682750 - A G 2385 0.9540 0.4360587002 743
rs2676 1 686500 + C G 2366 0.9464 0.3649619611 960
rs2678 1 686750 - C G 2379 0.9516 0.3642286675 958
rs2680 1 687000 - G A 2382 0.9528 0.3648194794 963
rs2692 1 690500 + G C 2373 0.9492 0.5128529288 559
rs2709 1 696750 + C G 2363 0.9452 0.7225983919 184
rs2739 1 706500 + A C 2377 0.9508 0.4150189314 835
rs2754 1 709250 + G C 2362 0.9448 0.3878069433 906
rs2756 1 709750 - G A 2361 0.9444 0.0235069886 2251
rs2760 1 710500 - G T 2364 0.9456 0.0380710660 2187
rs2762 1 711500 + A T 2382 0.9528 0.4792191436 653
rs2766 1 712750 + T G 2374 0.9496 0.5179022746 566
rs2769 1 713250 + C G 2391 0.9564 0.3379339189 1079
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rs6377 1 1697750 - G T 2376 0.9504 0.5103114478 551
rs6384 1 1699000 + G C 2381 0.9524 0.8152036959 93
rs6399 1 1703750 - G C 2389 0.9556 0.3807032231 919
rs6400 1 1704000 - T C 2372 0.9488 0.4198988196 803
rs6402 1 1705500 - G C 2358 0.9432 0.5780322307 421
rs6405 1 1707000 - C A 2362 0.9448 0.7904318374 110
rs6408 1 1707500 + T C 2366 0.9464 0.7918427726 111
rs6413 1 1709500 + T A 2377 0.9508 0.1306268406 1814
rs6416 1 1710000 - A G 2377 0.9508 0.4684476231 680
rs6417 1 1710250 - A T 2396 0.9584 0.8336811352 83
rs6464 1 1724250 + C T 2383 0.9532 0.2165337809 1475
rs6466 1 1725000 - T G 2364 0.9456 0.3371404399 1041
rs6480 1 1729250 - T A 2360 0.9440 0.2224576271 1434
rs6485 1 1730000 - C T 2374 0.9496 0.2038753159 1503
rs6491 1 1731500 - T C 2380 0.9520 0.2590336134 1304
rs6501 1 1734000 - T G 2361 0.9444 0.5955103770 387
rs6514 1 1737000 - G A 2381 0.9524 0.0867282654 1984
rs6515 1 1737250 - T G 2368 0.9472 0.4605152027 698
rs6521 1 1738250 - C G 2386 0.9544 0.2036881811 1516
rs6538 1 1747000 + T A 2374 0.9496 0.0126368997 2314
rs6541 1 1748000 - C A 2381 0.9524 0.1159176816 1860
rs6553 1 1753250 + A T 2385 0.9540 0.4666666667 689
rs6558 1 1754750 + G A 2367 0.9468 0.4072665822 850
rs6585 1 1759000 - A T 2369 0.9476 0.2880962431 1193
rs6588 1 1759750 + A C 2362 0.9448 0.4005080440 866
rs6624 1 1768000 - G T 2382 0.9528 0.5350545760 528
rs6635 1 1771000 + T A 2382 0.9528 0.5340050378 529
rs6654 1 1776750 + T A 2361 0.9444 0.1490893689 1698
rs6665 1 1780000 + C A 2368 0.9472 0.4068834459 846
rs6670 1 1781750 + T C 2384 0.9536 0.0660654362 2074
rs6673 1 1782500 + A T 2377 0.9508 0.7984854859 104
rs6685 1 1786250 - C A 2340 0.9360 0.4211538462 784
rs6688 1 1788000 - T A 2394 0.9576 0.0033416876 2378
rs6690 1 1788250 + G C 2378 0.9512 0.0843145500 1993
rs6694 1 1788500 - G T 2358 0.9432 0.4711620017 675
rs6701 1 1789750 + G C 2370 0.9480 0.3388185654 1027
rs6708 1 1791000 - G T 2394 0.9576 0.4548872180 723
rs6714 1 1792000 - T C 2372 0.9488 0.3178752108 1098
rs6715 1 1792250 - C G 2372 0.9488 0.5491146712 492
rs6719 1 1792500 - G A 2385 0.9540 0.4549266247 723
rs6720 1 1793000 - C G 2372 0.9488 0.1977234401 1523
rs6728 1 1794500 - C T 2377 0.9508 0.5323937737 526
rs6736 1 1796250 + G C 2379 0.9516 0.2021857923 1509
rs6742 1 1797250 + C G 2358 0.9432 0.7234944869 167
rs6760 1 1801750 - A C 2386 0.9544 0.7676026823 103
rs6762 1 1802250 + G C 2361 0.9444 0.4767047861 629
rs6791 1 1809500 - G A 2370 0.9480 0.9248945148 16
rs6798 1 1811000 - G A 2363 0.9452 0.2344477359 1375
rs6809 1 1813000 + A T 2375 0.9500 0.7715789474 104
rs6813 1 1814750 - C G 2360 0.9440 0.0752118644 2021
rs6880 1 1831750 + A C 2353 0.9412 0.7590310242 136
rs6883 1 1832500 - G C 2393 0.9572 0.2398662766 1382
rs6885 1 1833125 + C G 2347 0.9388 0.3981678739 846
rs6891 1 1833750 + G T 2386 0.9544 0.2414082146 1372
rs6892 1 1834000 - A C 2376 0.9504 0.0650252525 2075
rs6897 1 1835000 - T G 2381 0.9524 0.3996220076 855
rs6914 1 1839750 - A C 2368 0.9472 0.0232263514 2259
rs6919 1 1841000 - G C 2365 0.9460 0.5951374207 397
rs6921 1 1841250 + T A 2380 0.9520 0.4060924370 850
rs6937 1 1845750 - T C 2388 0.9552 0.6471943049 305
rs6938 1 1846000 - C G 2402 0.9608 0.3511656953 1021
rs6941 1 1847250 - A G 2375 0.9500 0.2949473684 1182
rs6947 1 1848250 + T C 2395 0.9580 0.0561586639 2133
rs6951 1 1849000 - C A 2374 0.9496 0.3180286436 1116
rs6955 1 1849750 - C G 2369 0.9476 0.3195441114 1110
rs6968 1 1856500 + T A 2392 0.9568 0.1877090301 1577
rs6978 1 1857500 + C A 2378 0.9512 0.5859966358 406
rs6979 1 1858500 + G C 2369 0.9476 0.5759814268 438
rs6987 1 1860250 - T A 2377 0.9508 0.1171644931 1852
rs6988 1 1860750 + G C 2391 0.9564 0.3801756587 926
rs6990 1 1861500 - C T 2386 0.9544 0.2122799665 1483
rs7037 1 1872500 - G C 2362 0.9448 0.8454699407 49
rs7079 1 1884500 - T C 2365 0.9460 0.1179704017 1836
rs7093 1 1893000 + T A 2369 0.9476 0.1262135922 1808
rs7106 1 1896750 + A T 2366 0.9464 0.0948858833 1935
rs7154 1 1907500 + C G 2374 0.9496 0.1649115417 1653
rs7161 1 1909750 + T C 2368 0.9472 0.0044341216 2347
rs7181 1 1915750 - C G 2375 0.9500 0.2136842105 1474
rs7187 1 1917500 + C G 2372 0.9488 0.7864671164 114
rs7216 1 1928750 - T G 2386 0.9544 0.3459765298 1016
rs7224 1 1931000 + A G 2388 0.9552 0.6631072027 265
rs7231 1 1933500 + T A 2377 0.9508 0.1960454354 1534
rs7236 1 1935250 + A C 2366 0.9464 0.1770921386 1602
rs7243 1 1936500 - G T 2373 0.9492 0.6219974716 334
rs7246 1 1938750 - A G 2375 0.9500 0.3715789474 930
rs7248 1 1939000 + T G 2382 0.9528 0.6211167086 335
rs7253 1 1940500 - C A 2377 0.9508 0.5321834245 513
rs7255 1 1941250 + A C 2383 0.9532 0.4727234578 656
rs7257 1 1942250 + C A 2375 0.9500 0.1469473684 1727
rs7258 1 1942500 - C G 2386 0.9544 0.0018860017 2377
rs7273 1 1946000 - T A 2384 0.9536 0.0027265101 2371
rs7276 1 1946250 - G T 2360 0.9440 0.1442796610 1728
rs7296 1 1953250 + C G 2376 0.9504 0.4888468013 609
rs7316 1 1958000 + T G 2380 0.9520 0.1136554622 1868
rs7327 1 1961000 - A T 2378 0.9512 0.2798570227 1233
rs7339 1 1963000 - T C 2373 0.9492 0.2003792668 1518
rs7347 1 1964000 - T A 2390 0.9560 0.0422594142 2195
rs7350 1 1965250 + A T 2369 0.9476 0.2000844238 1520
rs7375 1 1972750 + T C 2385 0.9540 0.7037735849 216
rs7387 1 1975750 - A T 2393 0.9572 0.0417885499 2200
rs7389 1 1976250 + T G 2381 0.9524 0.6459470811 300
rs7417 1 1986000 - T G 2373 0.9492 0.7446270544 151
rs7422 1 1988250 - C T 2382 0.9528 0.7399244332 163
rs7441 1 1995000 + C T 2356 0.9424 0.1763582343 1588
rs7482 1 2005250 - C G 2386 0.9544 0.0605616094 2102
rs7493 1 2008000 - T A 2373 0.9492 0.0086388538 2333
rs7501 1 2009000 + G T 2378 0.9512 0.2157275021 1459
rs7520 1 2013500 - G C 2358 0.9432 0.5496183206 470
rs7533 1 2018750 - T G 2373 0.9492 0.1283185841 1803
rs7559 1 2024250 - A G 2377 0.9508 0.0982330669 1927
rs7573 1 2027750 + C A 2398 0.9592 0.7351959967 164
rs7625 1 2046250 + G T 2369 0.9476 0.5861122837 385
rs7635 1 2048500 + G C 2376 0.9504 0.3655303030 942
rs7637 1 2048750 + G T 2379 0.9516 0.3631778058 958
rs7640 1 2051500 + T G 2379 0.9516 0.0052543085 2354
rs7650 1 2055500 - T C 2368 0.9472 0.0834037162 1992
rs7652 1 2056250 - G C 2371 0.9484 0.1237874315 1820
rs7653 1 2057250 - T C 2386 0.9544 0.1263621123 1820
rs7655 1 2057750 + C A 2390 0.9560 0.1518828452 1732
rs7663 1 2060500 - A C 2368 0.9472 0.8750000000 35
rs7678 1 2063000 - A G 2357 0.9428 0.0033941451 2341
rs7695 1 2068250 - C G 2374 0.9496 0.0393850042 2193
rs7712 1 2073000 - T C 2365 0.9460 0.6399577167 315
rs7734 1 2077500 + G C 2352 0.9408 0.4961734694 602
rs7738 1 2078000 + G A 2356 0.9424 0.1786926995 1601
rs7740 1 2078250 + T A 2371 0.9484 0.1336988612 1791
rs7796 1 2094250 - A T 2361 0.9444 0.7488352393 152
rs7819 1 2102750 + A G 2364 0.9456 0.0067681895 2332
rs7844 1 2109500 - G T 2378 0.9512 0.3170731707 1125
rs7850 1 2110750 + A G 2375 0.9500 0.3077894737 1152
rs7857 1 2112000 - G A 2391 0.9564 0.6921790046 243
rs7858 1 2112125 + A C 2370 0.9480 0.6902953586 239
rs7864 1 2112250 + A G 2377 0.9508 0.3083718973 1151
rs7865 1 2112500 + G A 2360 0.9440 0.6898305085 236
rs7908 1 2123500 + C G 2373 0.9492 0.1582385166 1684
rs7916 1 2127500 + A C 2379 0.9516 0.0294241278 2241
rs7948 1 2138500 + T A 2378 0.9512 0.1799831791 1596
rs7964 1 2143250 - A G 2366 0.9464 0.3324175824 1055
rs7982 1 2148250 + C G 2383 0.9532 0.1741502308 1618
rs7990 1 2153000 + T A 2395 0.9580 0.3722338205 945
rs7991 1 2153250 + G C 2391 0.9564 0.2057716437 1513
rs7992 1 2153750 - C A 2370 0.9480 0.2067510549 1497
rs7994 1 2154750 + T A 2376 0.9504 0.4947390572 608
rs7996 1 2155000 - T A 2363 0.9452 0.5000000000 588
rs7997 1 2155250 + C G 2375 0.9500 0.1934736842 1545
rs8006 1 2156500 + A T 2372 0.9488 0.2512647555 1320
rs8010 1 2157500 + C G 2395 0.9580 0.2384133612 1398
rs8013 1 2157750 - C T 2380 0.9520 0.0319327731 2233
rs8020 1 2160750 - C A 2359 0.9436 0.0366680797 2187
rs8028 1 2161750 + C G 2366 0.9464 0.7704987320 116
rs8029 1 2162000 - G C 2354 0.9416 0.1197960918 1823
rs8045 1 2164750 - G A 2389 0.9556 0.1969443282 1540
rs8057 1 2167750 - C A 2368 0.9472 0.0206925676 2270
rs8063 1 2169000 - A T 2378 0.9512 0.0330109336 2222
rs8068 1 2170500 - T G 2357 0.9428 0.2781077641 1221
rs8075 1 2171250 - T G 2366 0.9464 0.2762045647 1231
rs8081 1 2171500 - A G 2377 0.9508 0.2780816155 1232
rs8111 1 2178500 + T C 2371 0.9484 0.6836777731 248
rs8124 1 2180500 + A C 2361 0.9444 0.6747141042 255
rs8128 1 2181000 - C T 2355 0.9420 0.1335456476 1773
rs8147 1 2186000 - G T 2389 0.9556 0.6709920469 253
rs8150 1 2186500 - T C 2356 0.9424 0.0471137521 2139
rs8155 1 2187500 - T A 2373 0.9492 0.0878634640 1970
rs8160 1 2188250 + A T 2369 0.9476 0.3258758970 1074
rs8180 1 2192750 + T C 2359 0.9436 0.6358626537 313
rs8211 1 2202500 - C T 2362 0.9448 0.7444961897 153
rs8213 1 2203500 - G C 2378 0.9512 0.7426408747 156
rs8219 1 2204750 + G A 2372 0.9488 0.2588532884 1306
rs8221 1 2205500 - G C 2376 0.9504 0.1496212121 1723
rs8225 1 2206250 + G T 2369 0.9476 0.2530603630 1317
rs8227 1 2207000 + C G 2375 0.9500 0.1492631579 1722
rs8235 1 2207750 - G A 2380 0.9520 0.0115546218 2325
rs8236 1 2208000 + C T 2383 0.9532 0.1030214016 1919
rs8238 1 2208750 - T C 2378 0.9512 0.8973927670 19
rs8243 1 2210000 - T A 2388 0.9552 0.0320351759 2236
rs8248 1 2211250 + T G 2379 0.9516 0.0870113493 1978
rs8296 1 2224250 + T G 2375 0.9500 0.1614736842 1678
rs8323 1 2232000 + C A 2384 0.9536 0.5750838926 434
rs8329 1 2232500 - A C 2386 0.9544 0.6389354568 320
rs8332 1 2233250 + G C 2372 0.9488 0.1148819562 1870
rs8336 1 2234000 - A C 2374 0.9496 0.0916175232 1957
rs8352 1 2239000 - T C 2373 0.9492 0.5495153814 459
rs8361 1 2240500 + T C 2383 0.9532 0.0935795216 1955
rs8364 1 2242250 - T A 2371 0.9484 0.3439477014 1007
rs8376 1 2245750 + A T 2388 0.9552 0.6055276382 370
rs8384 1 2247750 - T G 2365 0.9460 0.1078224101 1881
rs8389 1 2249250 + T A 2397 0.9588 0.4146850229 828
rs8391 1 2249500 - C A 2359 0.9436 0.0241627808 2249
rs8396 1 2251000 - A G 2362 0.9448 0.0933530906 1947
rs8399 1 2251250 - T A 2378 0.9512 0.2703952902 1258
rs8405 1 2254500 + C G 2369 0.9476 0.3064584213 1132
rs8437 1 2262750 + T G 2368 0.9472 0.2138935811 1470
rs8451 1 2267000 - G T 2379 0.9516 0.1588902900 1675
rs8461 1 2269250 + G T 2369 0.9476 0.0901224145 1968
rs8487 1 2276250 + C G 2377 0.9508 0.4995793016 600
rs8507 1 2282750 + A C 2373 0.9492 0.5524652339 475
rs8508 1 2286125 - G A 2372 0.9488 0.5183389545 548
rs8523 1 2289500 - T A 2377 0.9508 0.3102650400 1143
rs8551 1 2296500 - T G 2370 0.9480 0.2324894515 1393
rs8586 1 2310000 + T G 2349 0.9396 0.0502341422 2118
rs8599 1 2313500 - T A 2379 0.9516 0.1275746112 1810
rs8611 1 2317500 - A G 2363 0.9452 0.0344900550 2201
rs8619 1 2320250 - C A 2386 0.9544 0.2282062028 1418
rs8641 1 2325750 + G A 2378 0.9512 0.2159377628 1469
rs8654 1 2327750 + T A 2354 0.9416 0.4029311810 819
rs8675 1 2333000 - G A 2365 0.9460 0.0706131078 2042
rs8679 1 2334000 - A G 2367 0.9468 0.1130122518 1859
rs8680 1 2334250 - A T 2401 0.9604 0.0560183257 2140
rs8688 1 2335750 + A T 2382 0.9528 0.4219143577 782
rs8692 1 2336500 + C T 2361 0.9444 0.4955527319 585
rs8703 1 2339250 + C T 2370 0.9480 0.4400843882 728
rs8704 1 2339750 + C T 2382 0.9528 0.0673803526 2070
rs8713 1 2343250 + T C 2370 0.9480 0.0668776371 2061
rs8716 1 2344000 - A T 2374 0.9496 0.3637320977 965
rs8744 1 2349500 - T C 2385 0.9540 0.4176100629 794
rs8793 1 2362500 + C G 2389 0.9556 0.0998325659 1941
rs8797 1 2364000 + T A 2383 0.9532 0.0503566932 2152
rs8799 1 2364750 + C G 2373 0.9492 0.5903919090 392
rs8813 1 2368000 + T C 2368 0.9472 0.2221283784 1424
rs8838 1 2375500 - A C 2375 0.9500 0.0671578947 2064
rs8840 1 2376500 - A G 2368 0.9472 0.3802787162 906
rs8842 1 2376750 + T A 2386 0.9544 0.6064543168 366
rs8852 1 2378000 - G C 2366 0.9464 0.6090448014 361
rs8855 1 2378250 + A C 2372 0.9488 0.3905986509 882
rs8868 1 2381750 - C G 2378 0.9512 0.3599663583 977
rs8889 1 2385750 - T A 2381 0.9524 0.0340193196 2219
rs8907 1 2389750 - G T 2389 0.9556 0.3823775638 928
rs8910 1 2390750 + A T 2386 0.9544 0.3053227158 1159
rs8917 1 2392250 + A T 2348 0.9392 0.0291737649 2212
rs8927 1 2396750 + T G 2381 0.9524 0.3695926081 948
rs8939 1 2401000 - T A 2377 0.9508 0.1386201094 1761
rs8950 1 2404750 - T G 2334 0.9336 0.0488431877 2108
rs8983 1 2414750 - T A 2360 0.9440 0.3163135593 1108
rs9020 1 2428000 - T C 2367 0.9468 0.0986480777 1916
rs9044 1 2433500 - T G 2380 0.9520 0.0575630252 2114
rs9053 1 2436000 + A T 2395 0.9580 0.0582463466 2125
rs9086 1 2442500 + T G 2372 0.9488 0.1854974705 1565
rs9090 1 2443750 - A C 2384 0.9536 0.2625838926 1291
rs9105 1 2447500 - G T 2385 0.9540 0.1974842767 1525
rs9138 1 2457250 + G A 2383 0.9532 0.5809903483 431
rs9154 1 2460750 + T G 2374 0.9496 0.8037068239 96
rs9160 1 2462000 + C T 2361 0.9444 0.4008894536 849
rs9164 1 2463000 + T C 2373 0.9492 0.8175305520 80
rs9193 1 2472250 - C A 2386 0.9544 0.0683151718 2068
rs9206 1 2476000 + G C 2364 0.9456 0.0970812183 1922
rs9214 1 2477750 + T G 2373 0.9492 0.3487147071 992
rs9221 1 2480250 + C T 2378 0.9512 0.6192178301 321
rs9225 1 2482000 - G C 2376 0.9504 0.0690235690 2057
rs9247 1 2487250 - T C 2374 0.9496 0.2580033698 1310
rs9257 1 2489500 - T A 2366 0.9464 0.4241335587 789
rs9273 1 2495000 - C G 2392 0.9568 0.7617056856 131
rs9277 1 2496000 + G A 2373 0.9492 0.1809945217 1588
rs9279 1 2497250 + C A 2377 0.9508 0.1015986538 1920
rs9283 1 2498000 - T C 2372 0.9488 0.7137436762 199
P.12 P.22 Pexact Fmax Plrt
rs10 552 40 7.897327e-01 -6.880004e-03 7.355343e-01
rs18 969 184 7.608230e-01 -7.017332e-03 7.315304e-01
rs29 568 43 7.955141e-01 -7.241148e-03 7.227853e-01
rs65 969 1227 6.475412e-01 -1.001675e-02 6.246577e-01
rs73 44 10 1.792470e-12 3.031502e-01 1.281239e-12
rs114 491 34 7.663683e-01 5.487764e-03 7.894076e-01
rs128 101 9 9.408599e-06 1.296006e-01 1.000431e-05
rs130 1013 1144 9.615127e-01 -2.140946e-03 9.168114e-01
rs143 1175 547 6.512540e-01 9.313705e-03 6.497695e-01
rs150 1077 1025 5.518478e-01 -1.294844e-02 5.281254e-01
rs179 1182 451 5.314637e-01 -1.389052e-02 4.992849e-01
rs183 777 107 7.095590e-01 7.911363e-03 7.013030e-01
rs186 352 13 6.744629e-01 -1.169247e-02 5.610005e-01
rs200 919 148 4.835439e-01 -1.503326e-02 4.614783e-01
rs239 879 146 8.686118e-01 2.933954e-03 8.865215e-01
rs245 595 60 2.974640e-01 2.073699e-02 3.178111e-01
rs298 158 4 5.332414e-01 1.352844e-02 5.321997e-01
rs300 539 37 7.151055e-01 -9.067916e-03 6.555613e-01
rs312 1084 247 1.519431e-01 -2.976650e-02 1.462321e-01
rs324 1182 729 5.319219e-01 -1.327751e-02 5.184146e-01
rs332 186 2 5.868817e-01 -1.979058e-02 2.921687e-01
rs335 271 8 1.000000e+00 -4.755448e-03 8.144097e-01
rs348 1244 606 2.665170e-02 -4.644521e-02 2.343156e-02
rs361 1241 625 2.644058e-02 -4.609637e-02 2.454817e-02
rs365 1009 219 1.000000e+00 -1.128918e-03 9.560362e-01
rs372 640 60 9.392500e-01 -2.909283e-03 8.871837e-01
rs375 1133 491 1.051190e-01 3.366786e-02 1.010453e-01
rs377 377 21 5.229310e-01 1.303071e-02 5.329229e-01
rs383 470 1857 8.368077e-01 4.208657e-03 8.387263e-01
rs386 376 20 6.079733e-01 9.397962e-03 6.511660e-01
rs388 469 1877 7.566014e-01 5.702339e-03 7.822095e-01
rs404 305 10 8.719568e-01 -7.047102e-03 7.269459e-01
rs422 685 65 5.631152e-01 -1.404033e-02 4.900891e-01
rs435 1121 960 4.252612e-01 -1.698039e-02 4.065017e-01
rs455 1116 953 3.741519e-01 -1.888441e-02 3.573957e-01
rs476 858 1441 8.610085e-02 -3.580274e-02 7.589664e-02
rs530 1168 520 4.106588e-01 1.689319e-02 4.088982e-01
rs534 658 71 6.078561e-01 1.100202e-02 5.938422e-01
rs555 870 139 1.000000e+00 -4.462103e-05 9.982668e-01
rs568 992 1165 5.599132e-01 1.249582e-02 5.426421e-01
rs573 996 1146 5.949839e-01 1.112988e-02 5.884125e-01
rs611 523 34 7.059878e-01 -1.057133e-02 6.028696e-01
rs614 49 0 1.000000e+00 -1.044108e-02 4.744374e-01
rs615 531 36 7.809945e-01 -8.641384e-03 6.713746e-01
rs616 1149 727 1.860640e-01 2.737959e-02 1.814052e-01
rs620 396 13 1.636558e-01 -2.971704e-02 1.286633e-01
rs635 342 2006 6.728706e-01 7.013036e-03 7.359386e-01
rs663 1047 1113 1.806454e-01 -2.780076e-02 1.739745e-01
rs670 1083 247 2.119366e-01 -2.592644e-02 2.043851e-01
rs675 1082 1050 2.291128e-01 -2.571579e-02 2.085855e-01
rs683 1146 925 1.136159e-01 -3.290729e-02 1.078714e-01
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rs8797 222 9 1.962640e-01 2.595007e-02 2.342420e-01
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rs8855 1127 363 9.312700e-01 1.966577e-03 9.237014e-01
rs8868 1090 311 7.896177e-01 5.236285e-03 7.985136e-01
rs8889 162 0 1.122125e-01 -3.521739e-02 1.690319e-02
rs8907 1095 366 1.528542e-01 2.959616e-02 1.484385e-01
rs8910 997 230 4.691901e-01 1.496308e-02 4.656148e-01
rs8917 135 1 7.211982e-01 -1.501322e-02 4.228469e-01
rs8927 1106 327 8.950286e-01 3.169856e-03 8.770964e-01
rs8939 573 43 7.310089e-01 -9.425981e-03 6.435022e-01
rs8950 224 2 1.741581e-01 -3.290659e-02 7.017461e-02
rs8983 1011 241 6.344063e-01 9.545838e-03 6.431610e-01
rs9020 435 16 1.314292e-01 -3.342268e-02 8.864686e-02
rs9044 258 8 8.512890e-01 8.819002e-04 9.657549e-01
rs9053 261 9 7.082375e-01 6.657561e-03 7.482913e-01
rs9086 734 73 2.766418e-01 -2.404950e-02 2.362954e-01
rs9090 934 159 5.970481e-01 -1.164917e-02 5.686100e-01
rs9105 778 82 1.746408e-01 -2.914162e-02 1.498043e-01
rs9138 1135 817 2.929163e-01 2.175220e-02 2.884667e-01
rs9154 740 1538 5.582735e-01 1.208825e-02 5.576869e-01
rs9160 1131 381 8.977540e-01 2.747747e-03 8.937952e-01
rs9164 706 1587 8.905569e-01 2.798743e-03 8.916904e-01
rs9193 310 8 4.192810e-01 -2.064584e-02 2.914061e-01
rs9206 425 17 2.416167e-01 -2.548086e-02 1.996153e-01
rs9214 1107 274 2.056402e-01 -2.701870e-02 1.872622e-01
rs9221 1169 888 4.098401e-02 -4.244370e-02 3.810057e-02
rs9225 310 9 6.301987e-01 -1.519428e-02 4.445674e-01
rs9247 903 161 7.478328e-01 6.541503e-03 7.502525e-01
rs9257 1147 430 7.050670e-01 7.582818e-03 7.122782e-01
rs9273 878 1383 6.124726e-01 -1.111946e-02 5.854879e-01
rs9277 711 74 6.776690e-01 -1.062405e-02 6.029838e-01
rs9279 431 26 7.357473e-01 6.747320e-03 7.440796e-01
rs9283 960 1213 6.511091e-01 9.557678e-03 6.420473e-01
GenABEL documentation built on May 30, 2017, 3:36 a.m.
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Description Slots Methods Author(s) See Also Examples
Description
This class contains objects holding all GWAA data – phenotypes, genotypes and other relevant information
Slots
phdata:dataframe with phenotypic data used in GWAA
gtdata:object of class
snp.data-classused to store genotypic data, map, etc.
Methods
- [
signature(x = "gwaa.data", i = "ANY", j = "ANY", drop = "ANY"): subset operations. x[i,j] will select people listed in i and SNPs listed in j.- show
signature(object = "gwaa.data"): shows both parts of the object. Take care that the objects are usually very large!- summary
signature(object = "gwaa.data"): Calls standard summary to describe phenotypic part and callssummary.snp.datatosnp.data-class- gtdata
signature(object = "gwaa.data"): returns genotypic data (object ofsnp.data-class)- phdata
signature(object = "gwaa.data"): returns phenotypic data (adata.frame)- phdata<-
signature(object = "gwaa.data"): method do modify phenotypic data (adata.frame)
Author(s)
Yurii Aulchenko
See Also
snp.data-class,
load.gwaa.data,
snp.mx-class
Examples
1 2 3 4 5 6 7 8 |
Example output
Loading required package: MASS
Loading required package: GenABEL.data
id sex age qt1 qt2 qt3 bt
p1 p1 1 43.4 -0.58 4.46 1.43 0
p2 p2 1 48.2 0.80 6.32 3.90 1
p3 p3 0 37.9 -0.52 3.26 5.05 1
p4 p4 1 53.8 -1.55 888.00 3.76 1
p5 p5 1 47.5 0.25 5.70 2.89 1
p6 p6 0 45.0 0.15 4.65 1.87 0
p7 p7 0 52.0 -0.56 4.64 2.49 0
p8 p8 1 42.5 NA 5.77 2.68 1
p9 p9 0 29.7 -2.26 0.71 1.45 0
p10 p10 0 45.8 -1.32 3.26 0.85 0
@nids = 10
@nsnps = 12
@nbytes = 3
@idnames = p1 p2 p3 p4 p5 p6 p7 p8 p9 p10
@snpnames = rs10 rs18 rs29 rs65 rs73 rs114 rs128 rs130 rs143 rs150 rs179 rs183
@chromosome = 1 1 1 1 1 1 1 1 1 1 1 1
@coding = 08 0b 0c 03 04 03 0c 04 08 0f 0c 03
@strand = 01 01 02 01 01 01 02 01 01 01 02 01
@map = 2500 3500 5750 13500 14250 24500 27000 27250 31000 33250 41500 42500
@male = 1 1 0 1 1 0 0 1 0 0
@gtps =
40 40 40 80 40 40 40 40 c0 c0 80 40
40 40 00 00 40 40 40 c0 40 40 c0 40
40 40 00 80 40 40 40 40 c0 c0 80 40
id sex age qt1 qt2 qt3 bt
p1 p1 1 43.4 -0.58 4.46 1.43 0
p2 p2 1 48.2 0.80 6.32 3.90 1
p3 p3 0 37.9 -0.52 3.26 5.05 1
p4 p4 1 53.8 -1.55 888.00 3.76 1
p5 p5 1 47.5 0.25 5.70 2.89 1
p6 p6 0 45.0 0.15 4.65 1.87 0
p7 p7 0 52.0 -0.56 4.64 2.49 0
p8 p8 1 42.5 NA 5.77 2.68 1
p9 p9 0 29.7 -2.26 0.71 1.45 0
p10 p10 0 45.8 -1.32 3.26 0.85 0
@nids = 10
@nsnps = 12
@nbytes = 3
@idnames = p1 p2 p3 p4 p5 p6 p7 p8 p9 p10
@snpnames = rs10 rs18 rs29 rs65 rs73 rs114 rs128 rs130 rs143 rs150 rs179 rs183
@chromosome = 1 1 1 1 1 1 1 1 1 1 1 1
@coding = 08 0b 0c 03 04 03 0c 04 08 0f 0c 03
@strand = 01 01 02 01 01 01 02 01 01 01 02 01
@map = 2500 3500 5750 13500 14250 24500 27000 27250 31000 33250 41500 42500
@male = 1 1 0 1 1 0 0 1 0 0
@gtps =
40 40 40 80 40 40 40 40 c0 c0 80 40
40 40 00 00 40 40 40 c0 40 40 c0 40
40 40 00 80 40 40 40 40 c0 c0 80 40
rs10 rs18 rs29 rs65 rs73 rs114 rs128 rs130 rs143 rs150
p1 0 0 0 1 0 0 0 0 2 2
p2 0 0 NA NA 0 0 0 2 0 0
p3 0 0 NA 1 0 0 0 0 2 2
p4 0 0 NA NA 0 0 0 2 NA 1
p5 0 1 0 2 0 0 0 2 2 2
p6 0 0 0 0 0 0 0 1 NA 2
p7 1 1 1 2 0 0 0 2 1 1
p8 0 0 0 2 NA 0 0 2 1 1
p9 0 1 0 2 0 0 0 0 2 2
p10 0 0 0 2 0 0 0 2 0 0
p11 0 0 NA 2 0 0 0 1 1 1
p12 0 0 0 1 0 NA 0 1 2 2
Chromosome Position Strand A1 A2 NoMeasured CallRate Q.2 P.11
rs10 1 2500 + T G 2384 0.9536 0.1325503356 1792
rs18 1 3500 + G A 2385 0.9540 0.2802935010 1232
rs29 1 5750 - G T 2374 0.9496 0.1377422072 1763
rs65 1 13500 + A T 2378 0.9512 0.7197224558 182
rs73 1 14250 + A G 2385 0.9540 0.0134171908 2331
rs114 1 24500 + A T 2393 0.9572 0.1167989971 1868
rs128 1 27000 - G T 2391 0.9564 0.0248849854 2281
rs130 1 27250 + A G 2379 0.9516 0.6937788987 222
rs143 1 31000 + T G 2377 0.9508 0.4772822886 655
rs150 1 33250 + C A 2369 0.9476 0.6599831152 267
rs179 1 41500 - G T 2365 0.9460 0.4405919662 732
rs183 1 42500 + A T 2363 0.9452 0.2096910707 1479
rs186 1 43000 + A G 2376 0.9504 0.0795454545 2011
rs200 1 47000 + A T 2384 0.9536 0.2548238255 1317
rs239 1 57750 - A G 2369 0.9476 0.2471506965 1344
rs245 1 60500 + A T 2380 0.9520 0.1502100840 1725
rs298 1 76250 + C A 2362 0.9448 0.0351397121 2200
rs300 1 77000 + A C 2383 0.9532 0.1286193873 1807
rs312 1 78500 - G A 2370 0.9480 0.3329113924 1039
rs324 1 82500 + G C 2365 0.9460 0.5581395349 454
rs332 1 84500 - A G 2372 0.9488 0.0400505902 2184
rs335 1 85250 + A G 2383 0.9532 0.0602182123 2104
rs348 1 88000 + G C 2380 0.9520 0.5159663866 530
rs361 1 90000 + T G 2378 0.9512 0.5237594617 512
rs365 1 91250 - C G 2384 0.9536 0.3034815436 1156
rs372 1 92750 + C G 2370 0.9480 0.1603375527 1670
rs375 1 93250 - T A 2373 0.9492 0.4456384324 749
rs377 1 95000 - T A 2371 0.9484 0.0883593420 1973
rs383 1 96000 - G C 2358 0.9432 0.8871925360 31
rs386 1 96250 - T A 2375 0.9500 0.0875789474 1979
rs388 1 96500 - C A 2377 0.9508 0.8883045856 31
rs404 1 101500 + G C 2386 0.9544 0.0681056161 2071
rs422 1 105500 - C A 2381 0.9524 0.1711465771 1631
rs435 1 109250 - A C 2385 0.9540 0.6375262055 304
rs455 1 114250 - C T 2370 0.9480 0.6375527426 301
rs476 1 118250 - C T 2402 0.9608 0.7785179017 103
rs530 1 131750 + C T 2390 0.9560 0.4619246862 702
rs534 1 132750 - G T 2376 0.9504 0.1683501684 1647
rs555 1 138500 - C A 2370 0.9480 0.2421940928 1361
rs568 1 142500 - A G 2381 0.9524 0.6976060479 224
rs573 1 143250 + T G 2370 0.9480 0.6936708861 228
rs611 1 157500 - T A 2377 0.9508 0.1243163652 1820
rs614 1 157750 + A G 2371 0.9484 0.0103331927 2322
rs615 1 158000 + G T 2375 0.9500 0.1269473684 1808
rs616 1 158500 + G T 2383 0.9532 0.5461603021 507
rs620 1 159250 - A G 2379 0.9516 0.0886927280 1970
rs635 1 165250 - T C 2364 0.9456 0.9208967851 16
rs663 1 170750 - G T 2376 0.9504 0.6887626263 216
rs670 1 172250 + T C 2385 0.9540 0.3306079665 1055
rs675 1 172750 - T C 2380 0.9520 0.6684873950 248
rs683 1 175750 + T C 2379 0.9516 0.6296763346 308
rs691 1 178250 + A G 2376 0.9504 0.3684764310 932
rs721 1 184500 + G T 2382 0.9528 0.4330394626 764
rs724 1 184750 - T A 2392 0.9568 0.3687290970 941
rs726 1 185000 - T C 2377 0.9508 0.1230542701 1825
rs735 1 187750 - C G 2358 0.9432 0.3710771841 921
rs739 1 189000 - A T 2390 0.9560 0.6815899582 245
rs754 1 193250 + T A 2373 0.9492 0.6925832280 228
rs755 1 193500 - C G 2362 0.9448 0.2993226080 1157
rs758 1 194000 - C G 2370 0.9480 0.6976793249 217
rs762 1 195000 - A T 2378 0.9512 0.3074011775 1140
rs768 1 196000 + T C 2400 0.9600 0.1395833333 1778
rs781 1 201750 - T A 2363 0.9452 0.1330935252 1773
rs785 1 202250 + G T 2363 0.9452 0.1487515870 1708
rs786 1 203250 + A G 2387 0.9548 0.2063259321 1504
rs789 1 204750 + T A 2376 0.9504 0.0814393939 2006
rs804 1 209000 + G A 2377 0.9508 0.0790912915 2019
rs814 1 211250 - T A 2386 0.9544 0.5393964795 508
rs830 1 215750 + C T 2371 0.9484 0.4983129481 613
rs849 1 220500 + T A 2373 0.9492 0.3763168984 925
rs851 1 220750 + C A 2386 0.9544 0.3074182733 1148
rs888 1 226500 - T A 2375 0.9500 0.0374736842 2199
rs891 1 227500 - G T 2380 0.9520 0.0743697479 2036
rs903 1 228500 - G A 2385 0.9540 0.0784067086 2025
rs928 1 235500 - T C 2383 0.9532 0.4139739824 811
rs954 1 241000 + T C 2379 0.9516 0.3167297184 1096
rs956 1 241750 - T C 2371 0.9484 0.0881484606 1970
rs977 1 246500 - T C 2362 0.9448 0.0836155800 1975
rs978 1 247000 + A T 2373 0.9492 0.5054782975 577
rs981 1 247750 + T A 2384 0.9536 0.2065855705 1496
rs983 1 248000 - A C 2383 0.9532 0.5127989929 562
rs1017 1 256750 - T A 2386 0.9544 0.4006705784 861
rs1020 1 257750 + G C 2371 0.9484 0.1701813581 1627
rs1061 1 269000 - A C 2371 0.9484 0.0113876002 2318
rs1067 1 274750 + T C 2373 0.9492 0.1550779604 1686
rs1084 1 278500 + T G 2397 0.9588 0.0567375887 2130
rs1093 1 281750 - C A 2372 0.9488 0.4013490725 829
rs1097 1 283000 - C T 2386 0.9544 0.4725481978 658
rs1110 1 286250 - A T 2373 0.9492 0.6019806153 362
rs1129 1 291000 + G T 2383 0.9532 0.0109106169 2332
rs1130 1 291500 - C G 2376 0.9504 0.6113215488 365
rs1133 1 292000 - T C 2376 0.9504 0.5791245791 416
rs1176 1 304500 - A G 2381 0.9524 0.4880302394 630
rs1178 1 304750 + C T 2378 0.9512 0.4966358284 616
rs1180 1 305250 - T C 2395 0.9580 0.4870563674 635
rs1181 1 305500 - A G 2365 0.9460 0.2940803383 1194
rs1187 1 306750 + G C 2376 0.9504 0.2133838384 1481
rs1191 1 307750 - A G 2377 0.9508 0.4892721918 619
rs1199 1 309500 - A C 2359 0.9436 0.0118694362 2303
rs1200 1 309750 + A G 2374 0.9496 0.5025273799 593
rs1204 1 310250 - G C 2369 0.9476 0.1430983537 1739
rs1206 1 311000 + T A 2379 0.9516 0.1231609920 1829
rs1213 1 313000 - G A 2382 0.9528 0.4695633921 673
rs1228 1 319000 - A T 2375 0.9500 0.2143157895 1460
rs1234 1 320500 - C G 2372 0.9488 0.5459527825 492
rs1239 1 321000 + G T 2381 0.9524 0.4523309534 726
rs1260 1 325500 + T C 2380 0.9520 0.1964285714 1525
rs1271 1 328750 - A C 2356 0.9424 0.0250424448 2241
rs1275 1 329250 - T G 2369 0.9476 0.5443224989 488
rs1277 1 329750 + G T 2371 0.9484 0.4519190215 706
rs1281 1 331750 - G T 2396 0.9584 0.5411101836 506
rs1282 1 332000 - C G 2369 0.9476 0.0848459266 1982
rs1295 1 335000 + G A 2379 0.9516 0.2713324926 1242
rs1296 1 335875 - T G 2345 0.9380 0.0051172708 2321
rs1307 1 336750 - A G 2382 0.9528 0.7458018472 134
rs1318 1 339000 + A T 2382 0.9528 0.5776658270 402
rs1335 1 342250 - G C 2385 0.9540 0.5677148847 427
rs1341 1 343000 - C T 2378 0.9512 0.0986122792 1927
rs1344 1 343750 + G T 2389 0.9556 0.4644202595 670
rs1372 1 350750 + C A 2368 0.9472 0.1993243243 1505
rs1389 1 354250 - T C 2352 0.9408 0.0603741497 2078
rs1402 1 358000 + C T 2384 0.9536 0.6430369128 307
rs1403 1 358250 + A C 2369 0.9476 0.3573237653 977
rs1405 1 358750 + C G 2366 0.9464 0.0019019442 2357
rs1414 1 360500 + A C 2375 0.9500 0.0680000000 2066
rs1423 1 362500 - T A 2381 0.9524 0.4002519950 862
rs1430 1 364250 - C A 2362 0.9448 0.0112193057 2309
rs1437 1 365500 + G A 2369 0.9476 0.4195863233 798
rs1452 1 369500 - T C 2366 0.9464 0.1760355030 1605
rs1467 1 372250 + G A 2362 0.9448 0.1828958510 1574
rs1476 1 373750 - G C 2398 0.9592 0.1834862385 1596
rs1543 1 389500 - A C 2362 0.9448 0.4788314987 637
rs1548 1 390500 - A T 2380 0.9520 0.4825630252 631
rs1559 1 392750 - C A 2363 0.9452 0.5666525603 430
rs1577 1 395500 + C G 2376 0.9504 0.2866161616 1203
rs1583 1 397000 + A C 2370 0.9480 0.3784810127 920
rs1585 1 397750 - A C 2373 0.9492 0.3324905183 1056
rs1590 1 399250 + G T 2381 0.9524 0.5107097858 586
rs1594 1 400250 + G T 2369 0.9476 0.1853102575 1566
rs1609 1 404750 + A C 2386 0.9544 0.0810980721 2016
rs1610 1 405000 + C A 2385 0.9540 0.1960167715 1535
rs1621 1 407000 + G C 2370 0.9480 0.9179324895 17
rs1634 1 409500 + T C 2376 0.9504 0.3118686869 1118
rs1636 1 409750 - C G 2398 0.9592 0.6040450375 374
rs1651 1 412750 - T A 2372 0.9488 0.1998313659 1517
rs1659 1 416250 - G C 2368 0.9472 0.6583614865 267
rs1664 1 417000 + C A 2382 0.9528 0.3394206549 1027
rs1667 1 417250 - C G 2381 0.9524 0.6587568249 271
rs1674 1 420500 - A T 2380 0.9520 0.3237394958 1076
rs1682 1 422750 + C A 2369 0.9476 0.0177289996 2285
rs1705 1 427500 - G A 2362 0.9448 0.0347163421 2198
rs1706 1 428500 - C G 2398 0.9592 0.3035863219 1172
rs1711 1 429500 - G A 2386 0.9544 0.0450544845 2175
rs1713 1 430250 + T A 2363 0.9452 0.1749894202 1610
rs1720 1 432500 - G C 2374 0.9496 0.0897219882 1967
rs1724 1 433500 + C T 2395 0.9580 0.0897703549 1984
rs1726 1 433750 - G A 2385 0.9540 0.2995807128 1170
rs1727 1 434000 - G C 2402 0.9608 0.2562447960 1336
rs1735 1 437000 + C G 2381 0.9524 0.5417891642 498
rs1747 1 439500 - G T 2373 0.9492 0.6148335440 344
rs1751 1 440250 + G C 2373 0.9492 0.0516224189 2131
rs1775 1 446000 + G T 2385 0.9540 0.6306079665 323
rs1785 1 447500 - A G 2387 0.9548 0.7903225806 99
rs1789 1 448000 - A C 2383 0.9532 0.7920688208 97
rs1796 1 451500 + A G 2379 0.9516 0.2459016393 1353
rs1823 1 458250 - C A 2387 0.9548 0.1478843737 1721
rs1840 1 461500 - C T 2373 0.9492 0.8185840708 67
rs1841 1 461750 + A T 2367 0.9468 0.1787072243 1584
rs1843 1 462000 + T A 2364 0.9456 0.2303299492 1410
rs1847 1 469875 - T A 2381 0.9524 0.0468290634 2160
rs1895 1 477750 + T G 2372 0.9488 0.0594435076 2096
rs1904 1 479500 + C T 2376 0.9504 0.9425505051 6
rs1921 1 484000 + A T 2371 0.9484 0.0588359342 2098
rs1928 1 487000 - G A 2378 0.9512 0.6099663583 356
rs1932 1 487750 - G T 2392 0.9568 0.3187709030 1112
rs1946 1 492000 - A T 2383 0.9532 0.6208560638 338
rs1950 1 493750 + C A 2383 0.9532 0.0751154008 2039
rs1953 1 494000 - T G 2388 0.9552 0.5161222781 556
rs1959 1 496500 + T G 2372 0.9488 0.4224283305 795
rs1962 1 497500 + C T 2377 0.9508 0.2503155238 1326
rs1989 1 502250 - C A 2382 0.9528 0.0104953820 2332
rs1997 1 503750 + G T 2388 0.9552 0.0665829146 2078
rs2001 1 505250 - A G 2377 0.9508 0.1870004207 1568
rs2039 1 514500 - T C 2373 0.9492 0.1441213654 1738
rs2058 1 519250 - C G 2382 0.9528 0.1647774979 1670
rs2061 1 520000 + T G 2383 0.9532 0.0146873689 2313
rs2075 1 522750 + A T 2379 0.9516 0.1345102984 1783
rs2078 1 524250 - A C 2392 0.9568 0.7938963211 112
rs2082 1 525500 + G A 2366 0.9464 0.8290363483 65
rs2100 1 531000 + C T 2373 0.9492 0.2855035820 1202
rs2108 1 533250 - G C 2380 0.9520 0.4903361345 605
rs2109 1 534000 - T G 2383 0.9532 0.2629039026 1282
rs2110 1 534250 + G A 2358 0.9432 0.1181085666 1834
rs2112 1 534500 + A G 2366 0.9464 0.3159340659 1104
rs2117 1 535250 + C A 2370 0.9480 0.3149789030 1109
rs2130 1 540250 - C A 2364 0.9456 0.2899746193 1189
rs2144 1 542250 - G T 2379 0.9516 0.6143337537 352
rs2153 1 544500 + C G 2366 0.9464 0.5097210482 566
rs2164 1 547500 + T C 2379 0.9516 0.4394703657 750
rs2177 1 550000 + T C 2375 0.9500 0.4869473684 622
rs2180 1 550750 + G C 2380 0.9520 0.1735294118 1630
rs2181 1 552000 - C G 2371 0.9484 0.0122311261 2313
rs2193 1 553250 + C G 2374 0.9496 0.4113310868 829
rs2229 1 561750 - G A 2389 0.9556 0.0948095437 1960
rs2237 1 564500 - G C 2380 0.9520 0.3638655462 965
rs2247 1 568000 + G A 2379 0.9516 0.1897856242 1562
rs2263 1 572000 - A C 2379 0.9516 0.9188734763 10
rs2277 1 575250 + A G 2357 0.9428 0.2492575308 1347
rs2292 1 579500 - G C 2361 0.9444 0.2753070733 1251
rs2311 1 584250 - G C 2367 0.9468 0.0887198986 1969
rs2333 1 590250 - C G 2395 0.9580 0.3248434238 1096
rs2336 1 591250 + C A 2368 0.9472 0.3526182432 1010
rs2338 1 592000 - A C 2384 0.9536 0.6159815436 360
rs2348 1 593250 + A G 2389 0.9556 0.0615320218 2107
rs2349 1 593750 + A C 2382 0.9528 0.3312342569 1076
rs2354 1 594750 - G A 2375 0.9500 0.6625263158 275
rs2356 1 596250 - T A 2346 0.9384 0.6649616368 276
rs2374 1 602000 + C A 2389 0.9556 0.3499372122 1019
rs2384 1 604250 + G T 2389 0.9556 0.3195897865 1123
rs2404 1 612750 + A G 2368 0.9472 0.7179054054 195
rs2408 1 613500 - G T 2370 0.9480 0.0909282700 1958
rs2416 1 615500 + C T 2388 0.9552 0.1593383585 1696
rs2443 1 622250 - G A 2369 0.9476 0.1456310680 1725
rs2468 1 628000 + A G 2400 0.9600 0.3200000000 1104
rs2470 1 628750 + A G 2387 0.9548 0.6797235023 243
rs2474 1 629500 - T G 2372 0.9488 0.0862141653 1978
rs2494 1 635250 + T G 2375 0.9500 0.4355789474 758
rs2506 1 640750 - T C 2378 0.9512 0.1957527334 1550
rs2508 1 641250 - G T 2389 0.9556 0.0797404772 2030
rs2517 1 643250 - C G 2378 0.9512 0.5527754415 471
rs2532 1 646500 - C G 2372 0.9488 0.4021922428 860
rs2533 1 646625 + C T 2388 0.9552 0.9015912898 20
rs2534 1 646750 - C T 2370 0.9480 0.9006329114 21
rs2535 1 647000 + A G 2358 0.9432 0.0059372349 2330
rs2540 1 650750 + C G 2370 0.9480 0.0898734177 1958
rs2547 1 653500 + A G 2373 0.9492 0.1101980615 1873
rs2551 1 654250 + G A 2396 0.9584 0.0916110184 1972
rs2556 1 656750 - C G 2369 0.9476 0.4054453356 838
rs2563 1 658000 + T A 2383 0.9532 0.5335711288 513
rs2567 1 658500 - C G 2373 0.9492 0.4951538137 601
rs2568 1 658750 + T G 2360 0.9440 0.4966101695 592
rs2571 1 660000 - A T 2373 0.9492 0.1630847029 1663
rs2578 1 661750 + C G 2370 0.9480 0.7006329114 203
rs2597 1 666250 - T G 2374 0.9496 0.0526537489 2131
rs2598 1 666750 + A C 2391 0.9564 0.0424508574 2199
rs2607 1 670000 - A T 2380 0.9520 0.3537815126 996
rs2631 1 674250 + T C 2384 0.9536 0.4393875839 754
rs2653 1 681250 + A C 2359 0.9436 0.1983891479 1509
rs2659 1 682000 - G A 2371 0.9484 0.0097005483 2326
rs2664 1 682750 - A G 2385 0.9540 0.4360587002 743
rs2676 1 686500 + C G 2366 0.9464 0.3649619611 960
rs2678 1 686750 - C G 2379 0.9516 0.3642286675 958
rs2680 1 687000 - G A 2382 0.9528 0.3648194794 963
rs2692 1 690500 + G C 2373 0.9492 0.5128529288 559
rs2709 1 696750 + C G 2363 0.9452 0.7225983919 184
rs2739 1 706500 + A C 2377 0.9508 0.4150189314 835
rs2754 1 709250 + G C 2362 0.9448 0.3878069433 906
rs2756 1 709750 - G A 2361 0.9444 0.0235069886 2251
rs2760 1 710500 - G T 2364 0.9456 0.0380710660 2187
rs2762 1 711500 + A T 2382 0.9528 0.4792191436 653
rs2766 1 712750 + T G 2374 0.9496 0.5179022746 566
rs2769 1 713250 + C G 2391 0.9564 0.3379339189 1079
rs2796 1 722750 + C A 2366 0.9464 0.0555790363 2114
rs2814 1 730750 - C T 2379 0.9516 0.0403530895 2192
rs2839 1 741500 - C T 2369 0.9476 0.2547488392 1312
rs2850 1 745750 + G C 2355 0.9420 0.4728237792 671
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rs6402 1 1705500 - G C 2358 0.9432 0.5780322307 421
rs6405 1 1707000 - C A 2362 0.9448 0.7904318374 110
rs6408 1 1707500 + T C 2366 0.9464 0.7918427726 111
rs6413 1 1709500 + T A 2377 0.9508 0.1306268406 1814
rs6416 1 1710000 - A G 2377 0.9508 0.4684476231 680
rs6417 1 1710250 - A T 2396 0.9584 0.8336811352 83
rs6464 1 1724250 + C T 2383 0.9532 0.2165337809 1475
rs6466 1 1725000 - T G 2364 0.9456 0.3371404399 1041
rs6480 1 1729250 - T A 2360 0.9440 0.2224576271 1434
rs6485 1 1730000 - C T 2374 0.9496 0.2038753159 1503
rs6491 1 1731500 - T C 2380 0.9520 0.2590336134 1304
rs6501 1 1734000 - T G 2361 0.9444 0.5955103770 387
rs6514 1 1737000 - G A 2381 0.9524 0.0867282654 1984
rs6515 1 1737250 - T G 2368 0.9472 0.4605152027 698
rs6521 1 1738250 - C G 2386 0.9544 0.2036881811 1516
rs6538 1 1747000 + T A 2374 0.9496 0.0126368997 2314
rs6541 1 1748000 - C A 2381 0.9524 0.1159176816 1860
rs6553 1 1753250 + A T 2385 0.9540 0.4666666667 689
rs6558 1 1754750 + G A 2367 0.9468 0.4072665822 850
rs6585 1 1759000 - A T 2369 0.9476 0.2880962431 1193
rs6588 1 1759750 + A C 2362 0.9448 0.4005080440 866
rs6624 1 1768000 - G T 2382 0.9528 0.5350545760 528
rs6635 1 1771000 + T A 2382 0.9528 0.5340050378 529
rs6654 1 1776750 + T A 2361 0.9444 0.1490893689 1698
rs6665 1 1780000 + C A 2368 0.9472 0.4068834459 846
rs6670 1 1781750 + T C 2384 0.9536 0.0660654362 2074
rs6673 1 1782500 + A T 2377 0.9508 0.7984854859 104
rs6685 1 1786250 - C A 2340 0.9360 0.4211538462 784
rs6688 1 1788000 - T A 2394 0.9576 0.0033416876 2378
rs6690 1 1788250 + G C 2378 0.9512 0.0843145500 1993
rs6694 1 1788500 - G T 2358 0.9432 0.4711620017 675
rs6701 1 1789750 + G C 2370 0.9480 0.3388185654 1027
rs6708 1 1791000 - G T 2394 0.9576 0.4548872180 723
rs6714 1 1792000 - T C 2372 0.9488 0.3178752108 1098
rs6715 1 1792250 - C G 2372 0.9488 0.5491146712 492
rs6719 1 1792500 - G A 2385 0.9540 0.4549266247 723
rs6720 1 1793000 - C G 2372 0.9488 0.1977234401 1523
rs6728 1 1794500 - C T 2377 0.9508 0.5323937737 526
rs6736 1 1796250 + G C 2379 0.9516 0.2021857923 1509
rs6742 1 1797250 + C G 2358 0.9432 0.7234944869 167
rs6760 1 1801750 - A C 2386 0.9544 0.7676026823 103
rs6762 1 1802250 + G C 2361 0.9444 0.4767047861 629
rs6791 1 1809500 - G A 2370 0.9480 0.9248945148 16
rs6798 1 1811000 - G A 2363 0.9452 0.2344477359 1375
rs6809 1 1813000 + A T 2375 0.9500 0.7715789474 104
rs6813 1 1814750 - C G 2360 0.9440 0.0752118644 2021
rs6880 1 1831750 + A C 2353 0.9412 0.7590310242 136
rs6883 1 1832500 - G C 2393 0.9572 0.2398662766 1382
rs6885 1 1833125 + C G 2347 0.9388 0.3981678739 846
rs6891 1 1833750 + G T 2386 0.9544 0.2414082146 1372
rs6892 1 1834000 - A C 2376 0.9504 0.0650252525 2075
rs6897 1 1835000 - T G 2381 0.9524 0.3996220076 855
rs6914 1 1839750 - A C 2368 0.9472 0.0232263514 2259
rs6919 1 1841000 - G C 2365 0.9460 0.5951374207 397
rs6921 1 1841250 + T A 2380 0.9520 0.4060924370 850
rs6937 1 1845750 - T C 2388 0.9552 0.6471943049 305
rs6938 1 1846000 - C G 2402 0.9608 0.3511656953 1021
rs6941 1 1847250 - A G 2375 0.9500 0.2949473684 1182
rs6947 1 1848250 + T C 2395 0.9580 0.0561586639 2133
rs6951 1 1849000 - C A 2374 0.9496 0.3180286436 1116
rs6955 1 1849750 - C G 2369 0.9476 0.3195441114 1110
rs6968 1 1856500 + T A 2392 0.9568 0.1877090301 1577
rs6978 1 1857500 + C A 2378 0.9512 0.5859966358 406
rs6979 1 1858500 + G C 2369 0.9476 0.5759814268 438
rs6987 1 1860250 - T A 2377 0.9508 0.1171644931 1852
rs6988 1 1860750 + G C 2391 0.9564 0.3801756587 926
rs6990 1 1861500 - C T 2386 0.9544 0.2122799665 1483
rs7037 1 1872500 - G C 2362 0.9448 0.8454699407 49
rs7079 1 1884500 - T C 2365 0.9460 0.1179704017 1836
rs7093 1 1893000 + T A 2369 0.9476 0.1262135922 1808
rs7106 1 1896750 + A T 2366 0.9464 0.0948858833 1935
rs7154 1 1907500 + C G 2374 0.9496 0.1649115417 1653
rs7161 1 1909750 + T C 2368 0.9472 0.0044341216 2347
rs7181 1 1915750 - C G 2375 0.9500 0.2136842105 1474
rs7187 1 1917500 + C G 2372 0.9488 0.7864671164 114
rs7216 1 1928750 - T G 2386 0.9544 0.3459765298 1016
rs7224 1 1931000 + A G 2388 0.9552 0.6631072027 265
rs7231 1 1933500 + T A 2377 0.9508 0.1960454354 1534
rs7236 1 1935250 + A C 2366 0.9464 0.1770921386 1602
rs7243 1 1936500 - G T 2373 0.9492 0.6219974716 334
rs7246 1 1938750 - A G 2375 0.9500 0.3715789474 930
rs7248 1 1939000 + T G 2382 0.9528 0.6211167086 335
rs7253 1 1940500 - C A 2377 0.9508 0.5321834245 513
rs7255 1 1941250 + A C 2383 0.9532 0.4727234578 656
rs7257 1 1942250 + C A 2375 0.9500 0.1469473684 1727
rs7258 1 1942500 - C G 2386 0.9544 0.0018860017 2377
rs7273 1 1946000 - T A 2384 0.9536 0.0027265101 2371
rs7276 1 1946250 - G T 2360 0.9440 0.1442796610 1728
rs7296 1 1953250 + C G 2376 0.9504 0.4888468013 609
rs7316 1 1958000 + T G 2380 0.9520 0.1136554622 1868
rs7327 1 1961000 - A T 2378 0.9512 0.2798570227 1233
rs7339 1 1963000 - T C 2373 0.9492 0.2003792668 1518
rs7347 1 1964000 - T A 2390 0.9560 0.0422594142 2195
rs7350 1 1965250 + A T 2369 0.9476 0.2000844238 1520
rs7375 1 1972750 + T C 2385 0.9540 0.7037735849 216
rs7387 1 1975750 - A T 2393 0.9572 0.0417885499 2200
rs7389 1 1976250 + T G 2381 0.9524 0.6459470811 300
rs7417 1 1986000 - T G 2373 0.9492 0.7446270544 151
rs7422 1 1988250 - C T 2382 0.9528 0.7399244332 163
rs7441 1 1995000 + C T 2356 0.9424 0.1763582343 1588
rs7482 1 2005250 - C G 2386 0.9544 0.0605616094 2102
rs7493 1 2008000 - T A 2373 0.9492 0.0086388538 2333
rs7501 1 2009000 + G T 2378 0.9512 0.2157275021 1459
rs7520 1 2013500 - G C 2358 0.9432 0.5496183206 470
rs7533 1 2018750 - T G 2373 0.9492 0.1283185841 1803
rs7559 1 2024250 - A G 2377 0.9508 0.0982330669 1927
rs7573 1 2027750 + C A 2398 0.9592 0.7351959967 164
rs7625 1 2046250 + G T 2369 0.9476 0.5861122837 385
rs7635 1 2048500 + G C 2376 0.9504 0.3655303030 942
rs7637 1 2048750 + G T 2379 0.9516 0.3631778058 958
rs7640 1 2051500 + T G 2379 0.9516 0.0052543085 2354
rs7650 1 2055500 - T C 2368 0.9472 0.0834037162 1992
rs7652 1 2056250 - G C 2371 0.9484 0.1237874315 1820
rs7653 1 2057250 - T C 2386 0.9544 0.1263621123 1820
rs7655 1 2057750 + C A 2390 0.9560 0.1518828452 1732
rs7663 1 2060500 - A C 2368 0.9472 0.8750000000 35
rs7678 1 2063000 - A G 2357 0.9428 0.0033941451 2341
rs7695 1 2068250 - C G 2374 0.9496 0.0393850042 2193
rs7712 1 2073000 - T C 2365 0.9460 0.6399577167 315
rs7734 1 2077500 + G C 2352 0.9408 0.4961734694 602
rs7738 1 2078000 + G A 2356 0.9424 0.1786926995 1601
rs7740 1 2078250 + T A 2371 0.9484 0.1336988612 1791
rs7796 1 2094250 - A T 2361 0.9444 0.7488352393 152
rs7819 1 2102750 + A G 2364 0.9456 0.0067681895 2332
rs7844 1 2109500 - G T 2378 0.9512 0.3170731707 1125
rs7850 1 2110750 + A G 2375 0.9500 0.3077894737 1152
rs7857 1 2112000 - G A 2391 0.9564 0.6921790046 243
rs7858 1 2112125 + A C 2370 0.9480 0.6902953586 239
rs7864 1 2112250 + A G 2377 0.9508 0.3083718973 1151
rs7865 1 2112500 + G A 2360 0.9440 0.6898305085 236
rs7908 1 2123500 + C G 2373 0.9492 0.1582385166 1684
rs7916 1 2127500 + A C 2379 0.9516 0.0294241278 2241
rs7948 1 2138500 + T A 2378 0.9512 0.1799831791 1596
rs7964 1 2143250 - A G 2366 0.9464 0.3324175824 1055
rs7982 1 2148250 + C G 2383 0.9532 0.1741502308 1618
rs7990 1 2153000 + T A 2395 0.9580 0.3722338205 945
rs7991 1 2153250 + G C 2391 0.9564 0.2057716437 1513
rs7992 1 2153750 - C A 2370 0.9480 0.2067510549 1497
rs7994 1 2154750 + T A 2376 0.9504 0.4947390572 608
rs7996 1 2155000 - T A 2363 0.9452 0.5000000000 588
rs7997 1 2155250 + C G 2375 0.9500 0.1934736842 1545
rs8006 1 2156500 + A T 2372 0.9488 0.2512647555 1320
rs8010 1 2157500 + C G 2395 0.9580 0.2384133612 1398
rs8013 1 2157750 - C T 2380 0.9520 0.0319327731 2233
rs8020 1 2160750 - C A 2359 0.9436 0.0366680797 2187
rs8028 1 2161750 + C G 2366 0.9464 0.7704987320 116
rs8029 1 2162000 - G C 2354 0.9416 0.1197960918 1823
rs8045 1 2164750 - G A 2389 0.9556 0.1969443282 1540
rs8057 1 2167750 - C A 2368 0.9472 0.0206925676 2270
rs8063 1 2169000 - A T 2378 0.9512 0.0330109336 2222
rs8068 1 2170500 - T G 2357 0.9428 0.2781077641 1221
rs8075 1 2171250 - T G 2366 0.9464 0.2762045647 1231
rs8081 1 2171500 - A G 2377 0.9508 0.2780816155 1232
rs8111 1 2178500 + T C 2371 0.9484 0.6836777731 248
rs8124 1 2180500 + A C 2361 0.9444 0.6747141042 255
rs8128 1 2181000 - C T 2355 0.9420 0.1335456476 1773
rs8147 1 2186000 - G T 2389 0.9556 0.6709920469 253
rs8150 1 2186500 - T C 2356 0.9424 0.0471137521 2139
rs8155 1 2187500 - T A 2373 0.9492 0.0878634640 1970
rs8160 1 2188250 + A T 2369 0.9476 0.3258758970 1074
rs8180 1 2192750 + T C 2359 0.9436 0.6358626537 313
rs8211 1 2202500 - C T 2362 0.9448 0.7444961897 153
rs8213 1 2203500 - G C 2378 0.9512 0.7426408747 156
rs8219 1 2204750 + G A 2372 0.9488 0.2588532884 1306
rs8221 1 2205500 - G C 2376 0.9504 0.1496212121 1723
rs8225 1 2206250 + G T 2369 0.9476 0.2530603630 1317
rs8227 1 2207000 + C G 2375 0.9500 0.1492631579 1722
rs8235 1 2207750 - G A 2380 0.9520 0.0115546218 2325
rs8236 1 2208000 + C T 2383 0.9532 0.1030214016 1919
rs8238 1 2208750 - T C 2378 0.9512 0.8973927670 19
rs8243 1 2210000 - T A 2388 0.9552 0.0320351759 2236
rs8248 1 2211250 + T G 2379 0.9516 0.0870113493 1978
rs8296 1 2224250 + T G 2375 0.9500 0.1614736842 1678
rs8323 1 2232000 + C A 2384 0.9536 0.5750838926 434
rs8329 1 2232500 - A C 2386 0.9544 0.6389354568 320
rs8332 1 2233250 + G C 2372 0.9488 0.1148819562 1870
rs8336 1 2234000 - A C 2374 0.9496 0.0916175232 1957
rs8352 1 2239000 - T C 2373 0.9492 0.5495153814 459
rs8361 1 2240500 + T C 2383 0.9532 0.0935795216 1955
rs8364 1 2242250 - T A 2371 0.9484 0.3439477014 1007
rs8376 1 2245750 + A T 2388 0.9552 0.6055276382 370
rs8384 1 2247750 - T G 2365 0.9460 0.1078224101 1881
rs8389 1 2249250 + T A 2397 0.9588 0.4146850229 828
rs8391 1 2249500 - C A 2359 0.9436 0.0241627808 2249
rs8396 1 2251000 - A G 2362 0.9448 0.0933530906 1947
rs8399 1 2251250 - T A 2378 0.9512 0.2703952902 1258
rs8405 1 2254500 + C G 2369 0.9476 0.3064584213 1132
rs8437 1 2262750 + T G 2368 0.9472 0.2138935811 1470
rs8451 1 2267000 - G T 2379 0.9516 0.1588902900 1675
rs8461 1 2269250 + G T 2369 0.9476 0.0901224145 1968
rs8487 1 2276250 + C G 2377 0.9508 0.4995793016 600
rs8507 1 2282750 + A C 2373 0.9492 0.5524652339 475
rs8508 1 2286125 - G A 2372 0.9488 0.5183389545 548
rs8523 1 2289500 - T A 2377 0.9508 0.3102650400 1143
rs8551 1 2296500 - T G 2370 0.9480 0.2324894515 1393
rs8586 1 2310000 + T G 2349 0.9396 0.0502341422 2118
rs8599 1 2313500 - T A 2379 0.9516 0.1275746112 1810
rs8611 1 2317500 - A G 2363 0.9452 0.0344900550 2201
rs8619 1 2320250 - C A 2386 0.9544 0.2282062028 1418
rs8641 1 2325750 + G A 2378 0.9512 0.2159377628 1469
rs8654 1 2327750 + T A 2354 0.9416 0.4029311810 819
rs8675 1 2333000 - G A 2365 0.9460 0.0706131078 2042
rs8679 1 2334000 - A G 2367 0.9468 0.1130122518 1859
rs8680 1 2334250 - A T 2401 0.9604 0.0560183257 2140
rs8688 1 2335750 + A T 2382 0.9528 0.4219143577 782
rs8692 1 2336500 + C T 2361 0.9444 0.4955527319 585
rs8703 1 2339250 + C T 2370 0.9480 0.4400843882 728
rs8704 1 2339750 + C T 2382 0.9528 0.0673803526 2070
rs8713 1 2343250 + T C 2370 0.9480 0.0668776371 2061
rs8716 1 2344000 - A T 2374 0.9496 0.3637320977 965
rs8744 1 2349500 - T C 2385 0.9540 0.4176100629 794
rs8793 1 2362500 + C G 2389 0.9556 0.0998325659 1941
rs8797 1 2364000 + T A 2383 0.9532 0.0503566932 2152
rs8799 1 2364750 + C G 2373 0.9492 0.5903919090 392
rs8813 1 2368000 + T C 2368 0.9472 0.2221283784 1424
rs8838 1 2375500 - A C 2375 0.9500 0.0671578947 2064
rs8840 1 2376500 - A G 2368 0.9472 0.3802787162 906
rs8842 1 2376750 + T A 2386 0.9544 0.6064543168 366
rs8852 1 2378000 - G C 2366 0.9464 0.6090448014 361
rs8855 1 2378250 + A C 2372 0.9488 0.3905986509 882
rs8868 1 2381750 - C G 2378 0.9512 0.3599663583 977
rs8889 1 2385750 - T A 2381 0.9524 0.0340193196 2219
rs8907 1 2389750 - G T 2389 0.9556 0.3823775638 928
rs8910 1 2390750 + A T 2386 0.9544 0.3053227158 1159
rs8917 1 2392250 + A T 2348 0.9392 0.0291737649 2212
rs8927 1 2396750 + T G 2381 0.9524 0.3695926081 948
rs8939 1 2401000 - T A 2377 0.9508 0.1386201094 1761
rs8950 1 2404750 - T G 2334 0.9336 0.0488431877 2108
rs8983 1 2414750 - T A 2360 0.9440 0.3163135593 1108
rs9020 1 2428000 - T C 2367 0.9468 0.0986480777 1916
rs9044 1 2433500 - T G 2380 0.9520 0.0575630252 2114
rs9053 1 2436000 + A T 2395 0.9580 0.0582463466 2125
rs9086 1 2442500 + T G 2372 0.9488 0.1854974705 1565
rs9090 1 2443750 - A C 2384 0.9536 0.2625838926 1291
rs9105 1 2447500 - G T 2385 0.9540 0.1974842767 1525
rs9138 1 2457250 + G A 2383 0.9532 0.5809903483 431
rs9154 1 2460750 + T G 2374 0.9496 0.8037068239 96
rs9160 1 2462000 + C T 2361 0.9444 0.4008894536 849
rs9164 1 2463000 + T C 2373 0.9492 0.8175305520 80
rs9193 1 2472250 - C A 2386 0.9544 0.0683151718 2068
rs9206 1 2476000 + G C 2364 0.9456 0.0970812183 1922
rs9214 1 2477750 + T G 2373 0.9492 0.3487147071 992
rs9221 1 2480250 + C T 2378 0.9512 0.6192178301 321
rs9225 1 2482000 - G C 2376 0.9504 0.0690235690 2057
rs9247 1 2487250 - T C 2374 0.9496 0.2580033698 1310
rs9257 1 2489500 - T A 2366 0.9464 0.4241335587 789
rs9273 1 2495000 - C G 2392 0.9568 0.7617056856 131
rs9277 1 2496000 + G A 2373 0.9492 0.1809945217 1588
rs9279 1 2497250 + C A 2377 0.9508 0.1015986538 1920
rs9283 1 2498000 - T C 2372 0.9488 0.7137436762 199
P.12 P.22 Pexact Fmax Plrt
rs10 552 40 7.897327e-01 -6.880004e-03 7.355343e-01
rs18 969 184 7.608230e-01 -7.017332e-03 7.315304e-01
rs29 568 43 7.955141e-01 -7.241148e-03 7.227853e-01
rs65 969 1227 6.475412e-01 -1.001675e-02 6.246577e-01
rs73 44 10 1.792470e-12 3.031502e-01 1.281239e-12
rs114 491 34 7.663683e-01 5.487764e-03 7.894076e-01
rs128 101 9 9.408599e-06 1.296006e-01 1.000431e-05
rs130 1013 1144 9.615127e-01 -2.140946e-03 9.168114e-01
rs143 1175 547 6.512540e-01 9.313705e-03 6.497695e-01
rs150 1077 1025 5.518478e-01 -1.294844e-02 5.281254e-01
rs179 1182 451 5.314637e-01 -1.389052e-02 4.992849e-01
rs183 777 107 7.095590e-01 7.911363e-03 7.013030e-01
rs186 352 13 6.744629e-01 -1.169247e-02 5.610005e-01
rs200 919 148 4.835439e-01 -1.503326e-02 4.614783e-01
rs239 879 146 8.686118e-01 2.933954e-03 8.865215e-01
rs245 595 60 2.974640e-01 2.073699e-02 3.178111e-01
rs298 158 4 5.332414e-01 1.352844e-02 5.321997e-01
rs300 539 37 7.151055e-01 -9.067916e-03 6.555613e-01
rs312 1084 247 1.519431e-01 -2.976650e-02 1.462321e-01
rs324 1182 729 5.319219e-01 -1.327751e-02 5.184146e-01
rs332 186 2 5.868817e-01 -1.979058e-02 2.921687e-01
rs335 271 8 1.000000e+00 -4.755448e-03 8.144097e-01
rs348 1244 606 2.665170e-02 -4.644521e-02 2.343156e-02
rs361 1241 625 2.644058e-02 -4.609637e-02 2.454817e-02
rs365 1009 219 1.000000e+00 -1.128918e-03 9.560362e-01
rs372 640 60 9.392500e-01 -2.909283e-03 8.871837e-01
rs375 1133 491 1.051190e-01 3.366786e-02 1.010453e-01
rs377 377 21 5.229310e-01 1.303071e-02 5.329229e-01
rs383 470 1857 8.368077e-01 4.208657e-03 8.387263e-01
rs386 376 20 6.079733e-01 9.397962e-03 6.511660e-01
rs388 469 1877 7.566014e-01 5.702339e-03 7.822095e-01
rs404 305 10 8.719568e-01 -7.047102e-03 7.269459e-01
rs422 685 65 5.631152e-01 -1.404033e-02 4.900891e-01
rs435 1121 960 4.252612e-01 -1.698039e-02 4.065017e-01
rs455 1116 953 3.741519e-01 -1.888441e-02 3.573957e-01
rs476 858 1441 8.610085e-02 -3.580274e-02 7.589664e-02
rs530 1168 520 4.106588e-01 1.689319e-02 4.088982e-01
rs534 658 71 6.078561e-01 1.100202e-02 5.938422e-01
rs555 870 139 1.000000e+00 -4.462103e-05 9.982668e-01
rs568 992 1165 5.599132e-01 1.249582e-02 5.426421e-01
rs573 996 1146 5.949839e-01 1.112988e-02 5.884125e-01
rs611 523 34 7.059878e-01 -1.057133e-02 6.028696e-01
rs614 49 0 1.000000e+00 -1.044108e-02 4.744374e-01
rs615 531 36 7.809945e-01 -8.641384e-03 6.713746e-01
rs616 1149 727 1.860640e-01 2.737959e-02 1.814052e-01
rs620 396 13 1.636558e-01 -2.971704e-02 1.286633e-01
rs635 342 2006 6.728706e-01 7.013036e-03 7.359386e-01
rs663 1047 1113 1.806454e-01 -2.780076e-02 1.739745e-01
rs670 1083 247 2.119366e-01 -2.592644e-02 2.043851e-01
rs675 1082 1050 2.291128e-01 -2.571579e-02 2.085855e-01
rs683 1146 925 1.136159e-01 -3.290729e-02 1.078714e-01
rs691 1137 307 1.859502e-01 -2.821694e-02 1.683605e-01
rs721 1173 445 9.004429e-01 -2.873032e-03 8.884819e-01
rs724 1138 313 2.920989e-01 -2.194591e-02 2.825685e-01
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