snp.coding-class: Class "snp.coding"

In GenABEL: genome-wide SNP association analysis

Description

This class contains the actual nucleotide codes for the typed SNPs

Slots

.Data:

nucleotide coding data

Methods

[

signature(x = "snp.coding", i = "ANY", j = "missing", drop = "missing"): subset operations. x[i] will show coding for SNPs selected in i.

coerce

signature(from = "snp.coding", to = "character"): converts SNP coding from internal (raw) to human-readable character.

show

signature(object = "snp.coding"): shows the object. Take care that this is internal representation

Author(s)

Yurii Aulchenko

See Also

snp.strand-class, gwaa.data-class, snp.data-class

Examples

	require(GenABEL.data)
	data(srdta)
	srdta@gtdata@coding[1:10]
	as.character(srdta@gtdata@coding[1:10])

GenABEL documentation built on May 30, 2017, 3:36 a.m.