View source: R/summary.hyperblm.R
summary.hyperblm | R Documentation |
It obtains summary output from class 'hyperblm' object. The summary output incldes the standard error, t-statistics, p values of the coefficients estimates. Also the estimated parameters of hyperbolic error distribution, the maximum likelihood, the stage one optimization method, the two-stage alternating iterations and the convergence code.
## S3 method for class 'hyperblm'
summary(object, hessian = FALSE,
nboots = 1000, ...)
## S3 method for class 'summary.hyperblm'
print(x,
digits = max(3, getOption("digits") - 3), ...)
object |
An object of class |
x |
An object of class |
hessian |
Logical. If is |
nboots |
Numeric. Number of bootstrap simulations to obtain the bootstrap estimate of parameters standard errors. |
digits |
Numeric. Desired number of digits when the object is printed. |
... |
Passes additional arguments to functions |
The function summary.hyperblm
provides two approaches to obtain
the standard error of parameters due to the fact that approximated
hessian matrix is not stable for such complex optimization. The first
approach is by approximated hessian matrix. The setting in the
argument list is hessian = TRUE
. The Hessian matrix is
approximated by function tsHessian
. However it may not
be reliable for some error distribution parameters, for instance, the
function obtains negative variance from the Hessian matrix. The second
approach is by parametric bootstrapping. The setting in the argument
list is hessian = FALSE
which is also the default setting. The
default number of bootstrap stimulations is 1000, but users can
increase this when accuracy has priority over efficiency. Although the
bootstrapping is fairly slow, it provides reliable standard errors.
summary.hyperblm
returns an object of class
summary.hyperblm
which is a list containing:
coefficients |
A names vector of regression coefficients. |
distributionParams |
A named vector of fitted hyperbolic error distribution parameters. |
fitted.values |
The fitted mean values. |
residuals |
The remaining after subtract fitted values from response. |
MLE |
The maximum likelihood value of the model. |
method |
The optimization method for stage one. |
paramStart |
The start values of parameters that the user specified (only where relevant). |
residsParamStart |
The start values of parameters returned by
|
call |
The matched call. |
terms |
The |
contrasts |
The contrasts used (only where relevant). |
xlevels |
The levels of the factors used in the fitting (only where relevant). |
offset |
The offset used (only where relevant). |
xNames |
The names of each explanatory variables. If explanatory
variables don't have names then they shall be named |
yVec |
The response vector. |
xMatrix |
The explanatory variables matrix. |
iterations |
Number of two-stage alternating iterations to convergency. |
convergence |
The convergence code for two-stage optimization: 0 if the system converged; 1 if first stage did not converge, 2 if the second stage did not converge, 3 if the both stages did not converge. |
breaks |
The cell boundaries found by a call the
|
hessian |
Hessian Matrix. Only where |
tval |
t-statistics of regression coefficient estimates. |
rdf |
Degrees of freedom. |
pval |
P-values of regression coefficients estimates. |
sds |
Standard errors of regression coefficient estimates. |
David Scott d.scott@auckland.ac.nz, Xinxing Li xli053@aucklanduni.ac.nz
Barndorff-Nielsen, O. (1977). Exponentially Decreasing Distribution for the Logarithm of Particle Size. In Proceedings of the Royal Society of London. Series A, Mathematical and Physical Sciences, Vol. 353, pp. 401–419.
Prause, K. (1999). The generalized hyperbolic models: Estimation, financial derivatives and risk measurement. PhD Thesis, Mathematics Faculty, University of Freiburg.
Trendall, Richard (2005). hypReg: A Function for Fitting a Linear Regression Model in R with Hyperbolic Error. Masters Thesis, Statistics Faculty, University of Auckland.
Paolella, Marc S. (2007). Intermediate Probability: A Compitational Approach. pp. 415 -Chichester: Wiley.
Scott, David J. and Wurtz, Diethelm and Chalabi, Yohan, (2011). Fitting the Hyperbolic Distribution with R: A Case Study of Optimization Techniques. In preparation.
Stryhn, H. and Christensen, J. (2003). Confidence intervals by the profile likelihood method, with applications in veterinary epidemiology. ISVEE X.
print.summary.hyperblm
prints the summary output in a
table.
hyperblm
fits linear model with hyperbolic
error distribution.
print.hyperblm
prints the regression result in a table.
coef.hyperblm
obtains the regression coefficients and
error distribution parameters of the fitted model.
plot.hyperblm
obtains a residual vs fitted value plot, a
histgram of residuals with error distribution density curve on top, a
histgram of log residuals with error distribution error density curve
on top and a QQ plot.
tsHessian
## stackloss data example
# airflow <- stackloss[, 1]
# temperature <- stackloss[, 2]
# acid <- stackloss[, 3]
# stack <- stackloss[, 4]
# hyperblm.fit <- hyperblm(stack ~ airflow + temperature + acid,
# tolerance = 1e-11)
# coef.hyperblm(hyperblm.fit)
# plot.hyperblm(hyperblm.fit, breaks = 20)
# summary.hyperblm(hyperblm.fit, hessian = FALSE)
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