siteMap: Draws sites of residency and adds a convex hull
In GeoLight: Analysis of Light Based Geolocator Data

Description Usage Arguments Details Author(s) Examples

Draw a map (from the R Package maps) showing the defined stationary sites

1 2	siteMap(crds, site, type = "points", quantiles = c(0.25, 0.75), hull = T, map.range = c("EuroAfrica", "AustralAsia", "America", "World"), ...)

`crds`	a `SpatialPoints` or `matrix` object, containing x and y coordinates (in that order).
`site`	a `numerical vector` assigning each row to a particular period. Stationary periods in numerical order and values >0, migration/movement periods 0.
`type`	either points, or cross to show all points for each site or only show the mean position of the site with standard deviation.
`quantiles`	the quantile of the error bars (cross) around the median.
`hull`	`logical`, if TRUE a convex hull will be plotted around the points of each site.
`map.range`	some possibilities to choose defined areas ("World (default)", "EuroAfrica","America","AustralAsia").
`...`	Arguments to be passed to methods, such as graphical parameters (see par).

Standard graphical paramters like pch, cex, lwd, lty and col are implemented. The color can be specified as either a vector of colors (e.g. c("blue", "red", ...)) or as a character string indicating a color ramp (at the moment only "random" and "rainbow" is available )

Simeon Lisovski & Tamara Emmenegger

data(hoopoe2)
 hoopoe2$tFirst <- as.POSIXct(hoopoe2$tFirst, tz = "GMT")
 hoopoe2$tSecond <- as.POSIXct(hoopoe2$tSecond, tz = "GMT")
crds <- coord(hoopoe2, degElevation = -6)
filter <- distanceFilter(hoopoe2, distance = 30)
site <- changeLight(hoopoe2, rise.prob = 0.1, set.prob = 0.1, plot = FALSE,
 summary = FALSE)$site
siteMap(crds[filter,], site[filter], xlim=c(-20,20), ylim=c(0,60),
 lwd=2, pch=20, cex=0.5, main="hoopoe2")