Files in GillespieSSA2
Gillespie's Stochastic Simulation Algorithm for Impatient People
MD5
NEWS.md
README.md
NAMESPACE
DESCRIPTION
R/RcppExports.R
R/ssa_method.R
R/compile_reactions.R
R/reaction.R
R/ssa_exact.R
R/ssa_plot.R
R/ode_em.R
R/ssa_simulation.R
R/port_reactions.R
R/ssa_btl.R
R/ssa_etl.R
R/package.R
R/zzz.R
src/ode_em.cpp
src/RcppExports.cpp
src/ssa_etl.cpp
src/ssa_method.h
src/test_helper_funs.cpp
src/ssa_exact.cpp
src/ssa_btl.cpp
src/ssa_simulation.cpp
src/utils.cpp
src/utils.h
src/ssa_method.cpp
inst/REFERENCES.bib
inst/CITATION
inst/doc/decaying_dimer.html
inst/doc/an_introduction.R
inst/doc/linear_chain.R
inst/doc/lotka_predator_prey.R
inst/doc/rm_predator_prey.html
inst/doc/linear_chain.html
inst/doc/epi_chain.html
inst/doc/epi_chain.Rmd
inst/doc/converting_from_GillespieSSA.R
inst/doc/radioactive_decay.Rmd
inst/doc/logistic_growth.html
inst/doc/converting_from_GillespieSSA.Rmd
inst/doc/lotka_predator_prey.Rmd
inst/doc/radioactive_decay.R
inst/doc/radioactive_decay.html
inst/doc/sir.Rmd
inst/doc/decaying_dimer.Rmd
inst/doc/sir.R
inst/doc/lotka_predator_prey.html
inst/doc/logistic_growth.R
inst/doc/rm_predator_prey.R
inst/doc/linear_chain.Rmd
inst/doc/epi_chain.R
inst/doc/an_introduction.html
inst/doc/sir.html
inst/doc/rm_predator_prey.Rmd
inst/doc/converting_from_GillespieSSA.html
inst/doc/an_introduction.Rmd
inst/doc/decaying_dimer.R
inst/doc/logistic_growth.Rmd
build/vignette.rds
build/partial.rdb
tests/testthat.R
tests/testthat/test-ssa_etl.R
tests/testthat/test-ode_em.R
tests/testthat/test-compile_reactions.R
tests/testthat/test-ssa_btl.R
tests/testthat/test-ssa_exact.R
tests/testthat/test-ssa.R
tests/testthat/helper-test_ssa_step.R
tests/testthat/helper-test_propensity.R
tests/testthat/test-reaction.R
vignettes/epi_chain.Rmd
vignettes/radioactive_decay.Rmd
vignettes/converting_from_GillespieSSA.Rmd
vignettes/lotka_predator_prey.Rmd
vignettes/sir.Rmd
vignettes/decaying_dimer.Rmd
vignettes/linear_chain.Rmd
vignettes/rm_predator_prey.Rmd
vignettes/an_introduction.Rmd
vignettes/logistic_growth.Rmd
man/GillespieSSA2.Rd
man/ssa.Rd
man/ode_em.Rd
man/ssa_exact.Rd
man/ssa_etl.Rd
man/port_reactions.Rd
man/print_ssa.Rd
man/compile_reactions.Rd
man/ssa_btl.Rd
man/plot_ssa.Rd
man/reaction.Rd
man/figures/dependencies.png
