plot_ssa: Simple plotting of ssa output

In GillespieSSA2: Gillespie's Stochastic Simulation Algorithm for Impatient People

Simple plotting of ssa output

Description

Provides basic functionally for simple and quick time series plot of simulation output from ssa().

Usage

plot_ssa(
  ssa_out,
  state = TRUE,
  propensity = FALSE,
  buffer = FALSE,
  firings = FALSE,
  geom = c("point", "step")
)

Arguments

ssa_out	Data object returned by ssa().
state	Whether or not to plot the state values.
propensity	Whether or not to plot the propensity values.
buffer	Whether or not to plot the buffer values.
firings	Whether or not to plot the reaction firings values.
geom	Which geom to use, must be one of "point", "step".

GillespieSSA2 documentation built on Jan. 24, 2023, 1:10 a.m.