GOhypergeometric3: GOhypergeometric
In GoMiner: Automate the Mapping Between a List of Genes and Gene Ontology Categories
GOhypergeometric3 R Documentation
GOhypergeometric
Description
compute the hypergeometric p value for gene enrichment in a GO category
Usage
GOhypergeometric3(tableSample3, tablePop3)
Arguments
tableSample3
sample return value of GOtable3()
tablePop3
population return value of GOtable3()
Value
returns a matrix with columns c("x","m","n","k","p")
Examples
#load("data/x_tableSample3.RData")
#load("data/x_tablePop3.RData")
hyper<-GOhypergeometric3(x_tableSample3,x_tablePop3)
GoMiner documentation built on April 12, 2025, 1:43 a.m.
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| GOhypergeometric3 | R Documentation |
GOhypergeometric
Description
compute the hypergeometric p value for gene enrichment in a GO category
Usage
GOhypergeometric3(tableSample3, tablePop3)
Arguments
tableSample3 |
sample return value of GOtable3() |
tablePop3 |
population return value of GOtable3() |
Value
returns a matrix with columns c("x","m","n","k","p")
Examples
#load("data/x_tableSample3.RData")
#load("data/x_tablePop3.RData")
hyper<-GOhypergeometric3(x_tableSample3,x_tablePop3)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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