HAP.ROR: Recursive Organizer (ROR)

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Functions to perform ROR for sequence-based association analysis

Author
Lue Ping Zhao and Xin Huang
Date of publication
2013-03-25 06:57:39
Maintainer
Xin Huang <xhuang.fhcrc@gmail.com>
License
GPL-2
Version
1.0

View on CRAN

Man pages

AIC
AIC/Deviance calculation
case.sub
case samples DRB1 alleles
cc.sim
case control simulation
collapse
group assignment
ctl.sub
control samples of DRB1 alleles
deletion
deletion searching
grp.list
grouping
HAP.ror
ROR
HAP.ROR-package
Recursive Organizer (ROR)
lib.sub
DRB1 cDNA sequences
lib.sub.names
unique DRB1 allele names in the sample
ODS.ror
output and plot for ROR result
proteinf
DRB1 amino acid sequences

Files in this package

HAP.ROR
HAP.ROR/MD5
HAP.ROR/R
HAP.ROR/R/ROR.R
HAP.ROR/NAMESPACE
HAP.ROR/man
HAP.ROR/man/proteinf.Rd
HAP.ROR/man/ODS.ror.Rd
HAP.ROR/man/lib.sub.Rd
HAP.ROR/man/lib.sub.names.Rd
HAP.ROR/man/HAP.ror.Rd
HAP.ROR/man/HAP.ROR-package.Rd
HAP.ROR/man/grp.list.Rd
HAP.ROR/man/deletion.Rd
HAP.ROR/man/ctl.sub.Rd
HAP.ROR/man/collapse.Rd
HAP.ROR/man/cc.sim.Rd
HAP.ROR/man/case.sub.Rd
HAP.ROR/man/AIC.Rd
HAP.ROR/DESCRIPTION
HAP.ROR/data
HAP.ROR/data/proteinf.rda
HAP.ROR/data/lib.sub.rda
HAP.ROR/data/lib.sub.names.rda
HAP.ROR/data/ctl.sub.rda
HAP.ROR/data/case.sub.rda