buildIMGTHLAGeneTypes: Describe IPD-IMGT/HLA Database Genes, Identifying Pseudogenes...
In HLAtools: Toolkit for HLA Immunogenomics
View source: R/extractGeneTypes.R
buildIMGTHLAGeneTypes R Documentation
Describe IPD-IMGT/HLA Database Genes, Identifying Pseudogenes and Gene Fragments
Description
buildIMGTHLAGeneTypes() scrapes 'hla.alleles.org/pages/genes/genes_list' and generates a data frame identifying each gene. It requires internet access to function. As such, this function always returns data for the current IPD-IMGT/HLA Database release.
Usage
buildIMGTHLAGeneTypes()
Value
A list object of two elements – 'version' and 'GeneTypes'. The 'version' element identifies the date on which the source table was generated. The 'GeneTypes' element is a data frame of three columns, identifying each gene supported by the IPD-IMGT/HLA Database, along with its molecular characteristics and its status as either a pseudogene or a gene fragment.
Note
For internal HLAtools use.
HLAtools documentation built on June 8, 2025, 12:24 p.m.
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View source: R/extractGeneTypes.R
| buildIMGTHLAGeneTypes | R Documentation |
Describe IPD-IMGT/HLA Database Genes, Identifying Pseudogenes and Gene Fragments
Description
buildIMGTHLAGeneTypes() scrapes 'hla.alleles.org/pages/genes/genes_list' and generates a data frame identifying each gene. It requires internet access to function. As such, this function always returns data for the current IPD-IMGT/HLA Database release.
Usage
buildIMGTHLAGeneTypes()
Value
A list object of two elements – 'version' and 'GeneTypes'. The 'version' element identifies the date on which the source table was generated. The 'GeneTypes' element is a data frame of three columns, identifying each gene supported by the IPD-IMGT/HLA Database, along with its molecular characteristics and its status as either a pseudogene or a gene fragment.
Note
For internal HLAtools use.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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